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OP131298.1__UWJ03986.1__Skadi11_5__00004
Bact-VirOP131298.1__UWJ03986.1__Skadi11_5__00004
Identity
- Accession:
- OP131298 ↗
- Kingdom:
- phage
Quality
69.8
mean pLDDT
Taxonomy
TaxID: 2971109
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-86
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ek3A01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.68 | 46.0 | 3.46e-01 | 71.0% | 52.4% |
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.66 | 52.0 | 3.79e-01 | 85.5% | 73.1% |
| 3bg2A03 | 1.10.3410.10 | Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain | 0.65 | 45.0 | 4.11e-01 | 73.9% | 96.9% |
| 6iknD01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.62 | 45.0 | 3.05e-01 | 78.3% | 74.2% |
| 1on2A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.62 | 42.0 | 4.37e-01 | 71.0% | 84.1% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.59 | 43.0 | 3.23e-01 | 76.8% | 73.0% |
| 1g4uS01 | 1.20.120.260 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Virulence factor YopE uncharacterised domain | 0.59 | 41.0 | 3.49e-01 | 75.4% | 74.8% |
| 1w2yA00 | 1.10.4010.10 | Mainly Alpha › Orthogonal Bundle › all-alpha NTP pyrophosphatase fold › Type II deoxyuridine triphosphatase | 0.58 | 47.0 | 3.40e-01 | 94.2% | 87.2% |
| 4od4A01 | 1.10.357.140 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase | 0.54 | 38.0 | 3.02e-01 | 75.4% | 98.1% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 39.0 | 3.61e-01 | 78.3% | 90.1% |
| 1ashA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 43.0 | 3.50e-01 | 94.2% | 85.7% |
| 3zs6A03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.53 | 39.0 | 2.76e-01 | 78.3% | 24.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4977717 | 620.1.1.2 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB | 0.82 | 59.0 | 4.56e-01 | 75.4% | 43.4% |
| 3499993 | 3722.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 | 0.80 | 58.0 | 3.59e-01 | 75.4% | 15.6% |
| 3654060 | 3722.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 | 0.80 | 58.0 | 3.89e-01 | 75.4% | 25.3% |
| 3470829 | 604.1.1.3 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › MAP65_ASE1 | 0.78 | 56.0 | 4.08e-01 | 75.4% | 33.7% |
| 4234798 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.61 | 36.0 | 3.05e-01 | 71.0% | 35.7% |
| 4260684 | 605.1.1.147 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › TMEM151 | 0.59 | 41.0 | 3.47e-01 | 75.4% | 44.0% |
| 4872584 | 5059.1.1.2 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Multi_Drug_Res | 0.57 | 40.0 | 3.42e-01 | 72.5% | 78.2% |
| 3995458 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.54 | 39.0 | 3.20e-01 | 76.8% | 48.9% |
| 3642682 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.53 | 39.0 | 3.33e-01 | 78.3% | 93.0% |
| 3679194 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.53 | 44.0 | 3.68e-01 | 94.2% | 90.4% |
| 3998866 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.52 | 43.0 | 3.29e-01 | 91.3% | 88.7% |
| 3513384 | 109.4.1.263 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UVSSA_N | 0.51 | 42.0 | 3.53e-01 | 91.3% | 92.5% |