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OP131587.1__UYL85409.1__gp07__00007
Bact-VirOP131587.1__UYL85409.1__gp07__00007
Identity
- Accession:
- OP131587 ↗
- Kingdom:
- phage
Quality
78.5
mean pLDDT
Taxonomy
TaxID: 2972492
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-58
Domain cluster:
rep: OL348188.1__UGC97282.1__X__00025__D2-50
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05489.19 best | Phage_tail_X | 62.3 | 3.60e-17 | 96.2% | 83.3% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c8qB02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.77 | 60.0 | 6.26e-01 | 98.1% | 100.0% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 53.0 | 4.58e-01 | 100.0% | 65.9% |
| 1ldjA06 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 46.0 | 4.41e-01 | 90.6% | 98.5% |
| 3e97A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 45.0 | 4.15e-01 | 96.2% | 93.6% |
| 2ymbA00 | 3.30.870.30 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain | 0.51 | 40.0 | 3.12e-01 | 100.0% | 98.7% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3966498 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.91 | 82.0 | 7.67e-01 | 100.0% | 81.5% |
| 1007201 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.85 | 74.0 | 6.74e-01 | 98.1% | 73.2% |
| 3666767 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.80 | 68.0 | 5.42e-01 | 100.0% | 47.6% |
| 4019982 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.79 | 66.0 | 6.34e-01 | 100.0% | 81.7% |
| 3303205 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 65.0 | 6.32e-01 | 100.0% | 81.7% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 64.0 | 6.40e-01 | 100.0% | 89.1% |
| 3338947 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.78 | 64.0 | 5.98e-01 | 100.0% | 73.8% |
| 4483829 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 68.0 | 6.38e-01 | 100.0% | 87.7% |
| 3611431 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.76 | 67.0 | 6.48e-01 | 100.0% | 88.3% |
| 3647286 | 101.15.1.7 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM_RLK | 0.76 | 63.0 | 5.69e-01 | 100.0% | 68.0% |
| 3448128 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.76 | 67.0 | 4.96e-01 | 100.0% | 40.0% |
| 3654876 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 66.0 | 4.91e-01 | 100.0% | 40.0% |
| 3367888 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.75 | 64.0 | 5.89e-01 | 100.0% | 74.3% |
| 3359799 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.74 | 65.0 | 4.83e-01 | 100.0% | 39.1% |
| 3185732 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 65.0 | 6.51e-01 | 100.0% | 96.4% |
| None | — | 0.74 | 65.0 | 4.91e-01 | 100.0% | 41.6% | |
| 3353525 | 101.15.1.6 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 | 0.73 | 64.0 | 4.88e-01 | 100.0% | 42.4% |
| 3716764 | 101.15.1.12 ↗ | alpha arrays › HTH › LysM domain › LysM domain › PF30403 | 0.73 | 64.0 | 6.19e-01 | 100.0% | 88.3% |
| 3305689 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.73 | 58.0 | 4.36e-01 | 100.0% | 35.0% |
| 4489502 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.72 | 63.0 | 6.11e-01 | 100.0% | 96.7% |
| 4047213 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.72 | 61.0 | 6.09e-01 | 100.0% | 94.5% |
| 4600619 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.70 | 60.0 | 5.66e-01 | 100.0% | 92.3% |
| 3970261 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.68 | 56.0 | 5.63e-01 | 100.0% | 94.4% |
| 3781552 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.66 | 54.0 | 4.91e-01 | 100.0% | 93.8% |
| 3164837 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.65 | 55.0 | 4.82e-01 | 100.0% | 63.7% |
| 4613422 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.61 | 48.0 | 3.20e-01 | 98.1% | 26.4% |
| 3942395 | 221.1.2.17 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › DUF1062 | 0.60 | 48.0 | 4.66e-01 | 100.0% | 93.8% |
| 5011622 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 45.0 | 3.96e-01 | 98.1% | 69.9% |
| 3386585 | 3536.1.1.0 ↗ | a+b complex topology › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains › Lmo1499 protein N-terminal domains | 0.53 | 42.0 | 3.94e-01 | 98.1% | 76.0% |
| 3385666 | 2484.1.1.197 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1, DNA_pol_B_exo2 | 0.50 | 36.0 | 2.37e-01 | 79.2% | 87.3% |