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OP131587.1__UYL85442.1__gp40__00040
Bact-VirOP131587.1__UYL85442.1__gp40__00040
Identity
- Accession:
- OP131587 ↗
- Kingdom:
- phage
Quality
75.8
mean pLDDT
Taxonomy
TaxID: 2972492
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 67-129
Domain cluster:
rep: OL348188.1__UGC97303.1__X__00046__D15-89
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 43.0 | 4.00e-01 | 93.7% | 48.1% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 42.0 | 4.15e-01 | 88.9% | 60.0% |
| 1zbsA03 | 1.10.720.160 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.66 | 48.0 | 4.36e-01 | 79.4% | 96.6% |
| 3ftdA02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.63 | 48.0 | 4.84e-01 | 87.3% | 82.5% |
| 2o5iN05 | 1.10.40.90 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › | 0.63 | 47.0 | 5.01e-01 | 93.7% | 100.0% |
| 4qndA00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.61 | 40.0 | 3.45e-01 | 84.1% | 43.3% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.61 | 38.0 | 3.17e-01 | 85.7% | 35.4% |
| 2pybA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.61 | 47.0 | 3.53e-01 | 82.5% | 90.1% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 37.0 | 3.73e-01 | 81.0% | 62.9% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.59 | 36.0 | 3.32e-01 | 82.5% | 45.9% |
| 3w04A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 41.0 | 2.75e-01 | 74.6% | 40.9% |
| 2kjfA00 | 1.20.225.10 | Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 | 0.57 | 32.0 | 3.33e-01 | 90.5% | 55.0% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 39.0 | 3.25e-01 | 73.0% | 71.3% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 40.0 | 3.45e-01 | 74.6% | 80.4% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 38.0 | 3.19e-01 | 73.0% | 69.6% |
| 2dgzA01 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.55 | 41.0 | 3.76e-01 | 85.7% | 84.3% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.54 | 38.0 | 3.68e-01 | 77.8% | 64.4% |
| 2xheA03 | 3.90.830.10 | Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a | 0.53 | 45.0 | 3.72e-01 | 98.4% | 82.6% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.52 | 37.0 | 3.41e-01 | 74.6% | 91.5% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 38.0 | 3.41e-01 | 77.8% | 88.6% |
| 4doyA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 45.0 | 3.28e-01 | 100.0% | 60.1% |
| 1z4eA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 40.0 | 3.13e-01 | 90.5% | 63.3% |
| 6pe0E01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 34.0 | 3.63e-01 | 98.4% | 84.9% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3598908 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.74 | 40.0 | 4.11e-01 | 93.7% | 55.0% |
| 3625768 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.71 | 44.0 | 5.37e-01 | 76.2% | 100.0% |
| 3588719 | 564.1.1.0 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors | 0.70 | 40.0 | 3.97e-01 | 95.2% | 53.8% |
| 3705227 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.67 | 55.0 | 5.18e-01 | 100.0% | 75.0% |
| 3930571 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.64 | 43.0 | 4.17e-01 | 77.8% | 62.9% |
| 4956003 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 52.0 | 3.54e-01 | 100.0% | 33.3% |
| 4989619 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 39.0 | 3.78e-01 | 98.4% | 61.4% |
| 3589343 | 604.39.1.6 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › QueT | 0.59 | 47.0 | 3.48e-01 | 87.3% | 66.7% |
| 4961403 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.59 | 48.0 | 3.10e-01 | 96.8% | 20.6% |
| 4355181 | 632.13.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like | 0.57 | 44.0 | 4.41e-01 | 87.3% | 96.9% |
| 3218722 | 101.1.1.52 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD | 0.57 | 31.0 | 3.15e-01 | 84.1% | 50.8% |
| 5057299 | 101.17.1.0 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins | 0.57 | 42.0 | 3.80e-01 | 84.1% | 81.1% |
| 5013583 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 37.0 | 3.42e-01 | 100.0% | 50.0% |
| 5022250 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.55 | 42.0 | 3.52e-01 | 87.3% | 100.0% |
| 4880806 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.54 | 45.0 | 3.92e-01 | 96.8% | 80.8% |
| 5062132 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 36.0 | 2.56e-01 | 96.8% | 22.0% |
| 3688281 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.54 | 39.0 | 3.41e-01 | 76.2% | 58.9% |
| 3958129 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.53 | 39.0 | 3.52e-01 | 77.8% | 58.8% |
| 3592316 | 7014.1.1.0 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain | 0.53 | 46.0 | 2.96e-01 | 100.0% | 76.0% |
| 3446444 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.52 | 42.0 | 2.71e-01 | 88.9% | 28.0% |
| 3633621 | 192.5.1.16 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › PF26729 | 0.52 | 40.0 | 3.73e-01 | 87.3% | 65.0% |
| 3756471 | 633.24.1.4 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › RIN1 | 0.52 | 41.0 | 3.38e-01 | 87.3% | 49.6% |
| 3998538 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.52 | 31.0 | 3.06e-01 | 79.4% | 52.9% |
| 3193048 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.51 | 44.0 | 3.83e-01 | 100.0% | 77.0% |
| 3923557 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.51 | 40.0 | 2.78e-01 | 85.7% | 48.5% |