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OP171943.1__UVD42298.1__X__00156

Bact-Vir

OP171943.1__UVD42298.1__X__00156

Identity

Accession:
OP171943 ↗
Kingdom:
phage

Quality

74.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-76
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26823.1 best T5_Terminase_small 75.7 6.00e-21 100.0% 35.0%
CATH (83)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 62.0 6.66e-01 76.4% 100.0%
2cmpA00 1.10.10.1400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Terminase, small subunit, N-terminal DNA-binding domain, HTH motif 0.83 71.0 7.12e-01 94.5% 100.0%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 74.0 6.23e-01 100.0% 75.3%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 67.0 6.08e-01 92.7% 68.6%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 5.84e-01 90.9% 74.4%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 70.0 5.95e-01 96.4% 73.9%
1etkA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 62.0 5.58e-01 85.5% 61.3%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 6.19e-01 94.5% 93.1%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.70e-01 90.9% 72.9%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.79 59.0 5.50e-01 83.6% 64.7%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 6.01e-01 85.5% 78.7%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 61.0 5.87e-01 85.5% 75.0%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 61.0 5.88e-01 85.5% 81.0%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 70.0 6.30e-01 100.0% 78.7%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 70.0 6.38e-01 100.0% 80.6%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.78 61.0 4.65e-01 85.5% 38.4%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.78 70.0 5.24e-01 100.0% 51.1%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 68.0 5.74e-01 96.4% 71.1%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 69.0 6.09e-01 100.0% 75.0%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 6.04e-01 89.1% 96.8%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 5.59e-01 83.6% 70.1%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 5.76e-01 98.2% 73.9%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 5.66e-01 96.4% 76.1%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.76 54.0 4.45e-01 74.5% 43.3%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 68.0 4.54e-01 100.0% 29.1%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.76 56.0 4.24e-01 81.8% 34.1%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 59.0 5.22e-01 85.5% 60.0%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 68.0 4.98e-01 100.0% 48.6%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 61.0 6.10e-01 90.9% 87.5%
3e7lA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 63.0 6.10e-01 90.9% 95.0%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 66.0 4.80e-01 100.0% 45.8%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 6.14e-01 90.9% 100.0%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 6.28e-01 96.4% 100.0%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 5.61e-01 100.0% 69.0%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 4.94e-01 100.0% 50.4%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 59.0 6.04e-01 90.9% 92.3%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 4.80e-01 100.0% 52.8%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 6.21e-01 98.2% 93.7%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.79e-01 100.0% 77.6%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 65.0 6.01e-01 100.0% 87.1%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.89e-01 90.9% 88.9%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 55.0 5.41e-01 81.8% 75.0%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 5.79e-01 92.7% 100.0%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.97e-01 100.0% 98.5%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.74e-01 92.7% 80.0%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 6.07e-01 94.5% 98.1%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 62.0 5.23e-01 100.0% 72.3%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 49.0 5.08e-01 72.7% 78.4%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 6.09e-01 98.2% 98.2%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 57.0 5.92e-01 89.1% 100.0%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 5.65e-01 89.1% 87.9%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 49.0 5.37e-01 72.7% 100.0%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 49.0 4.63e-01 74.5% 64.6%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.69 57.0 4.24e-01 92.7% 36.2%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 4.62e-01 92.7% 53.3%
4fx0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 60.0 4.67e-01 100.0% 45.1%
2avuB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.69 48.0 3.93e-01 80.0% 39.4%
3c2bA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 51.0 5.22e-01 81.8% 100.0%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 51.0 5.14e-01 80.0% 87.3%
2auwB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 47.0 4.36e-01 76.4% 57.1%
6s6hA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 47.0 3.83e-01 74.5% 38.5%
5hxgB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.67 47.0 4.49e-01 80.0% 63.1%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 48.0 4.37e-01 78.2% 55.3%
1qb2A00 1.10.260.30 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain 0.67 50.0 4.11e-01 83.6% 82.1%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.65 51.0 4.33e-01 87.3% 53.2%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 44.0 4.26e-01 76.4% 63.5%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 52.0 3.38e-01 92.7% 43.8%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 45.0 3.90e-01 74.5% 48.2%
3bd1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 44.0 4.18e-01 74.5% 86.2%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 43.0 4.02e-01 78.2% 59.1%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 48.0 4.33e-01 96.4% 63.2%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 46.0 4.36e-01 81.8% 78.1%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 42.0 3.93e-01 76.4% 58.8%
2de2A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 47.0 3.21e-01 85.5% 73.2%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 49.0 4.24e-01 98.2% 84.9%
1ltmA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.56 43.0 3.08e-01 87.3% 83.2%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 45.0 3.65e-01 89.1% 65.0%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 43.0 3.72e-01 85.5% 98.8%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.54 42.0 3.86e-01 85.5% 87.8%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.53 41.0 4.04e-01 83.6% 96.7%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 43.0 3.74e-01 89.1% 81.7%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.51 43.0 3.63e-01 92.7% 81.3%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.51 35.0 3.26e-01 74.5% 55.3%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4590594 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.92 63.0 7.27e-01 70.9% 97.5%
4480726 101.1.1.300 alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.88 64.0 6.76e-01 76.4% 86.0%
4204226 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.85 64.0 6.97e-01 80.0% 95.6%
4603338 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.84 72.0 6.56e-01 92.7% 71.4%
3290021 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.84 77.0 6.09e-01 100.0% 61.9%
3289886 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.84 76.0 6.07e-01 100.0% 61.0%
4007629 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.84 63.0 5.78e-01 80.0% 64.3%
4043241 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 67.0 5.91e-01 87.3% 62.5%
4333531 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 63.0 6.57e-01 80.0% 92.0%
3944389 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.83 76.0 6.50e-01 100.0% 78.8%
4612964 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.83 64.0 7.02e-01 87.3% 100.0%
4456382 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.83 64.0 5.35e-01 87.3% 50.0%
4182256 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.83 63.0 5.10e-01 85.5% 45.0%
3954318 101.1.1.300 alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.82 76.0 6.33e-01 100.0% 63.3%
4659432 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 62.0 5.55e-01 80.0% 61.3%
3288090 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.82 65.0 6.01e-01 85.5% 68.6%
3795916 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 59.0 6.48e-01 80.0% 93.3%
3946248 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.82 75.0 6.04e-01 100.0% 66.0%
3288236 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.82 74.0 6.21e-01 100.0% 71.1%
3958970 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.82 75.0 6.55e-01 100.0% 70.0%
4178355 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.82 74.0 6.01e-01 100.0% 68.0%
3987666 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.82 75.0 6.38e-01 100.0% 75.3%
3982095 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.81 75.0 6.06e-01 100.0% 67.3%
3973850 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.81 74.0 6.09e-01 100.0% 70.5%
3240446 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 65.0 6.55e-01 90.9% 87.3%
3286796 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.81 74.0 6.08e-01 100.0% 69.5%
4642479 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.81 74.0 6.09e-01 100.0% 68.4%
3974476 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 64.0 6.40e-01 87.3% 83.6%
3959738 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 74.0 6.09e-01 100.0% 60.0%
3289370 101.1.1.300 alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.81 73.0 5.93e-01 100.0% 64.0%
4142399 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.81 74.0 6.16e-01 100.0% 71.1%
3286340 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.81 73.0 6.07e-01 100.0% 74.2%
4466704 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.81 73.0 5.94e-01 100.0% 66.0%
3980686 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.81 63.0 6.60e-01 85.5% 92.0%
3283604 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.81 73.0 5.94e-01 100.0% 64.0%
3964673 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.81 63.0 5.19e-01 87.3% 48.9%
4554905 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.80 61.0 6.00e-01 81.8% 83.3%
4237551 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 63.0 5.23e-01 85.5% 50.5%
None 0.80 63.0 5.27e-01 87.3% 51.7%
4603528 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.80 64.0 5.70e-01 92.7% 62.7%
4282037 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.80 72.0 6.08e-01 100.0% 72.2%
3946422 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.80 71.0 6.04e-01 96.4% 75.3%
4414382 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.80 73.0 6.22e-01 100.0% 76.5%
3969664 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.80 70.0 6.47e-01 96.4% 82.4%
3908306 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.79 66.0 6.44e-01 92.7% 83.3%
3282047 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.79 72.0 5.85e-01 100.0% 70.0%
3280686 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.79 72.0 5.83e-01 100.0% 66.0%
3955106 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.79 71.0 6.02e-01 100.0% 72.2%
3971281 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.79 66.0 6.68e-01 89.1% 90.9%
3969641 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.79 63.0 5.50e-01 85.5% 60.0%
3980517 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.79 67.0 6.53e-01 90.9% 91.7%
4342882 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.79 65.0 6.36e-01 89.1% 93.3%
4501735 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 66.0 5.87e-01 89.1% 65.3%
2448404 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.79 62.0 6.07e-01 85.5% 80.0%
4133358 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.79 67.0 4.76e-01 94.5% 32.9%
3278040 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 55.0 5.41e-01 76.4% 68.3%
4998383 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.78 68.0 5.67e-01 96.4% 83.2%
4304581 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.78 61.0 5.12e-01 85.5% 51.1%
3970408 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.78 64.0 6.22e-01 87.3% 81.7%
3984540 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.78 65.0 6.54e-01 89.1% 90.9%
3586944 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.78 71.0 5.94e-01 100.0% 77.8%
3282225 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.78 61.0 5.38e-01 85.5% 60.0%
3968335 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.78 66.0 6.40e-01 90.9% 93.3%
2330636 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.78 61.0 6.22e-01 85.5% 88.7%
3166394 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 68.0 5.50e-01 96.4% 69.0%
4541333 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 62.0 6.49e-01 92.7% 98.0%
4596898 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.77 60.0 5.34e-01 90.9% 58.7%
4244028 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.77 61.0 5.94e-01 85.5% 81.7%
4289285 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 60.0 5.09e-01 85.5% 53.3%
3967748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 60.0 5.24e-01 87.3% 56.5%
4131887 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.76 67.0 5.99e-01 100.0% 75.9%
3291331 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.76 65.0 5.66e-01 92.7% 63.7%
3616846 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 63.0 6.17e-01 96.4% 85.0%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 54.0 5.82e-01 81.8% 91.1%
3640035 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 54.0 4.71e-01 80.0% 49.4%
3964388 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.76 62.0 5.89e-01 89.1% 89.1%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.75 53.0 5.59e-01 78.2% 82.0%
3969080 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.75 62.0 6.29e-01 90.9% 92.7%
5064701 101.1.2.879 alpha arrays › HTH › HTH › winged helix domain › DUF134 0.75 63.0 5.51e-01 90.9% 62.5%
3947091 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.75 64.0 6.26e-01 96.4% 96.7%
5078377 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 59.0 6.14e-01 87.3% 94.0%
3284051 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.74 58.0 5.51e-01 85.5% 73.8%
5021422 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 62.0 5.93e-01 94.5% 93.8%
4947436 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 61.0 6.12e-01 90.9% 90.9%
3972638 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.73 61.0 5.84e-01 92.7% 78.5%
3338097 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 61.0 6.14e-01 96.4% 94.5%
2464007 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 61.0 5.75e-01 92.7% 77.3%
4534822 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.72 60.0 5.41e-01 92.7% 86.7%
3597464 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 57.0 5.63e-01 92.7% 93.3%
3973709 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 60.0 4.81e-01 92.7% 48.6%
3971395 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 59.0 5.37e-01 92.7% 70.7%
3959252 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 60.0 5.84e-01 92.7% 85.0%
3544647 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.71 52.0 4.95e-01 78.2% 66.2%
3283374 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.69 62.0 5.15e-01 100.0% 61.1%
3163616 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.69 57.0 4.80e-01 92.7% 54.3%
4944726 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 56.0 5.45e-01 90.9% 83.3%
3590303 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.67 51.0 4.62e-01 83.6% 60.0%
3517677 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.65 54.0 5.24e-01 100.0% 92.3%
3964882 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 53.0 4.09e-01 96.4% 88.9%
3997733 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 52.0 4.95e-01 96.4% 89.2%
D2 medium residues 82-139
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26823.1 best T5_Terminase_small 88.1 9.00e-25 100.0% 36.9%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gaeA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.85 59.0 3.77e-01 91.4% 16.6%
3pyoY00 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.82 57.0 5.57e-01 72.4% 67.7%
4nqiD00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.82 73.0 4.83e-01 100.0% 27.6%
2hh7A00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.79 68.0 5.97e-01 98.3% 64.7%
2guzA00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.78 55.0 5.15e-01 81.0% 60.6%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.77 64.0 6.26e-01 100.0% 82.8%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.73 58.0 5.79e-01 87.9% 88.1%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 58.0 4.89e-01 100.0% 52.0%
1gaxA05 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.71 59.0 5.49e-01 94.8% 72.6%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.71 57.0 5.10e-01 100.0% 61.6%
3l8kA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 54.0 3.63e-01 84.5% 24.4%
1whuA00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.63 46.0 3.88e-01 82.8% 44.2%
2mpnA00 6.10.140.1340 Special › Helix non-globular › Helix Hairpins › 0.62 48.0 4.69e-01 91.4% 80.9%
1tfeA02 1.10.286.20 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › 0.57 39.0 4.34e-01 74.1% 91.1%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3700089 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.81 68.0 6.55e-01 93.1% 81.5%
3372432 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.81 65.0 5.83e-01 87.9% 73.8%
3586937 192.29.1.185 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › HisKA 0.80 64.0 5.51e-01 87.9% 64.4%
3794775 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.76 67.0 6.48e-01 100.0% 96.9%
3587855 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.65 48.0 5.03e-01 87.9% 96.0%