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OP172633.1__WAX05123.1__AB434P2_00050__00045

Bact-Vir

OP172633.1__WAX05123.1__AB434P2_00050__00045

Identity

Accession:
OP172633 ↗
Kingdom:
phage

Quality

90.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Agathobaculum_phage_AB434P2

TaxID: 2968527

Cluster

View cluster (24 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-235
PDB
Domain cluster: rep: IMGVR_UViG_648028040_000001-648028040-648194435__D26-229
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11863.14 best DUF3383 71.9 6.90e-20 76.9% 29.1%
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dadA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 43.0 5.44e-01 80.7% 93.0%
2b4aA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 40.0 5.30e-01 77.4% 96.6%
2qv0A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.73 42.0 5.38e-01 79.7% 97.5%
2h4aA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 41.0 4.97e-01 100.0% 85.8%
4ycsA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 40.0 5.15e-01 77.4% 96.7%
3h5tA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 43.0 5.22e-01 95.8% 98.5%
1jx6A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 41.0 4.79e-01 92.5% 83.4%
1tjyA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 41.0 4.70e-01 93.4% 81.7%
7kx9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 38.0 4.54e-01 81.6% 81.2%
4wzzA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 41.0 4.68e-01 93.4% 81.8%
2i2xB02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.66 42.0 5.08e-01 100.0% 97.1%
3qk7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 42.0 5.04e-01 95.8% 96.4%
3h5tA03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 43.0 4.90e-01 100.0% 87.3%
4rweA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 41.0 4.71e-01 93.4% 82.4%
3gbvA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 40.0 4.65e-01 93.4% 84.6%
1bmtA02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.65 44.0 5.07e-01 93.4% 92.4%
5dteA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 40.0 4.64e-01 92.5% 84.3%
3kjxA03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 38.0 4.55e-01 99.5% 85.8%
4yv7A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 40.0 4.53e-01 92.5% 81.5%
2mr5A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.64 41.0 4.96e-01 100.0% 98.5%
3d8uB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 38.0 4.49e-01 93.9% 82.7%
3qldA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.63 44.0 4.28e-01 100.0% 63.6%
3lkbA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 41.0 4.60e-01 99.5% 82.0%
2fn8A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 40.0 4.52e-01 94.3% 81.9%
6cv6D00 3.40.50.9100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II 0.63 42.0 4.97e-01 76.9% 97.9%
2fqxA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 43.0 4.57e-01 85.4% 78.9%
3pffA05 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.61 46.0 4.99e-01 75.9% 96.6%
2chrA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.61 44.0 4.57e-01 100.0% 77.7%
4y9tA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 39.0 4.28e-01 93.4% 76.1%
4aktB00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.59 55.0 4.76e-01 99.5% 89.2%
2bhsB01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 40.0 4.41e-01 74.1% 85.5%
1fdyB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 45.0 4.07e-01 100.0% 59.5%
4pioA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 40.0 4.27e-01 94.3% 81.8%
2hxsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 44.0 4.77e-01 82.5% 96.1%
2gruA01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 36.0 4.03e-01 86.3% 78.8%
3i6iA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 47.0 4.96e-01 100.0% 98.9%
3c5cB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 42.0 4.73e-01 79.7% 97.6%
2khzA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 38.0 4.26e-01 78.3% 87.7%
3ly1A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.56 42.0 4.16e-01 90.6% 72.0%
4df0A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 37.0 3.89e-01 100.0% 69.8%
3x44A01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 40.0 4.23e-01 73.1% 82.3%
3rm5B01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 45.0 4.04e-01 85.4% 78.6%
3clvA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 42.0 4.60e-01 79.2% 96.0%
3mfqA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.55 31.0 3.84e-01 75.5% 87.4%
2cjwA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 43.0 4.67e-01 99.1% 98.3%
6kikA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.54 43.0 3.97e-01 100.0% 64.4%
4bmvI00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 47.0 4.41e-01 92.5% 92.5%
7e7gA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.53 42.0 4.01e-01 92.0% 69.6%
3ru6B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 40.0 3.97e-01 100.0% 74.3%
4lgvA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 43.0 4.60e-01 94.3% 97.9%
3okpA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 42.0 4.49e-01 100.0% 95.2%
3pdiA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.52 31.0 3.54e-01 100.0% 77.9%
3n4fA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.52 46.0 4.30e-01 100.0% 76.0%
1jmkC01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 40.0 4.34e-01 95.3% 97.7%
3qtgA01 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.52 40.0 3.89e-01 100.0% 71.2%
4exbB00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.52 41.0 3.88e-01 100.0% 69.0%
1m32A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.52 42.0 3.98e-01 91.5% 72.0%
5uckB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 43.0 3.88e-01 100.0% 64.5%
2z9vA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.52 42.0 3.98e-01 92.5% 72.8%
3n4eA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.50 42.0 3.90e-01 100.0% 71.2%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3945699 2499.2.1.6 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 0.94 92.0 8.86e-01 100.0% 95.7%
3513465 2499.2.1.6 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 0.88 85.0 7.91e-01 100.0% 92.5%
3948874 2499.2.1.6 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 0.87 83.0 7.93e-01 100.0% 89.6%
4988098 2499.2.1.0 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 0.82 77.0 7.41e-01 100.0% 87.7%
3972497 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.73 44.0 5.37e-01 81.1% 93.2%
1005403 2007.1.2.11 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.72 39.0 4.84e-01 87.3% 83.5%
5057081 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.69 42.0 5.02e-01 79.7% 89.3%
4452099 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.68 40.0 4.80e-01 100.0% 85.7%
4930751 2007.1.3.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.68 40.0 4.99e-01 80.2% 94.5%
5007302 2007.3.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.63 43.0 5.08e-01 75.0% 98.0%
4989941 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 36.0 4.52e-01 77.4% 95.2%
3694612 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.61 50.0 4.20e-01 85.8% 93.7%
3593126 2007.3.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.61 44.0 4.80e-01 74.1% 94.3%
4994424 2007.3.1.6 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 0.60 43.0 4.88e-01 78.8% 94.5%
3844906 2004.1.1.512 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › URGCP 0.59 43.0 3.87e-01 75.5% 86.3%
3507568 207.1.1.218 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27086 0.59 40.0 4.51e-01 95.3% 89.1%
3587634 2007.1.7.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes 0.59 37.0 4.16e-01 86.3% 80.0%
3969876 2006.1.6.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.59 46.0 4.48e-01 80.7% 88.6%
3541218 2004.1.1.589 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › URGCP, URGCP_GTPase 0.58 43.0 2.99e-01 75.5% 36.2%
4882885 2002.1.1.113 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › CdhD 0.58 45.0 4.53e-01 100.0% 80.1%
4945090 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.57 43.0 4.72e-01 99.5% 95.9%
4337741 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.57 45.0 4.76e-01 83.0% 94.7%
4037461 2007.1.7.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › DHQ_synthase 0.57 36.0 4.10e-01 70.3% 85.2%
136673 2007.15.1.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr 0.56 38.0 4.26e-01 78.3% 87.7%
3672744 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.56 42.0 4.17e-01 77.8% 89.3%
3578138 2002.1.1.96 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › S-methyl_trans 0.55 39.0 4.15e-01 93.4% 83.9%
4429345 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.55 41.0 4.44e-01 77.8% 92.2%
3955367 2003.1.1.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N 0.54 43.0 4.57e-01 82.5% 97.3%
3232631 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.53 42.0 4.27e-01 80.2% 86.8%
3523224 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 41.0 4.06e-01 79.2% 77.8%
3802603 2002.1.1.11 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PK 0.53 43.0 3.93e-01 100.0% 65.5%
4982591 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.53 42.0 3.71e-01 84.4% 90.9%
4460822 2003.1.1.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N 0.53 45.0 4.68e-01 94.3% 97.4%
3893786 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 40.0 4.17e-01 79.2% 87.5%
4195006 2002.1.1.11 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PK 0.52 41.0 3.85e-01 100.0% 65.8%
4367172 7574.1.1.7 ↗ a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N 0.52 39.0 3.95e-01 75.0% 84.9%
4598856 7574.1.1.7 ↗ a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N 0.52 38.0 4.11e-01 80.2% 87.0%
4047665 7577.1.1.3 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 0.51 42.0 3.75e-01 92.5% 60.7%
2761420 2002.1.1.16 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.51 43.0 4.07e-01 100.0% 74.7%
5071955 7574.1.1.7 ↗ a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N 0.51 40.0 4.19e-01 80.2% 90.0%
D2 high residues 247-349
PDB
Domain cluster: rep: MG020111.1__ATN94175.1__Lb_11__00011__D262-343
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11863.14 best DUF3383 35.7 6.70e-09 100.0% 20.2%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sg7A00 1.10.1740.70 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB 0.67 38.0 4.28e-01 72.8% 73.3%
3umbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.65 40.0 4.55e-01 99.0% 81.0%
2ktmA00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.64 39.0 4.68e-01 71.8% 92.6%
1iuqA01 1.10.1200.50 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal 0.59 39.0 4.45e-01 98.1% 93.4%
2fgyA01 1.20.120.1310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain 0.57 39.0 3.88e-01 100.0% 68.2%
1nlxA00 1.20.120.320 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Group V grass pollen allergen 0.55 45.0 4.58e-01 99.0% 91.3%
2bmuB00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.54 46.0 3.59e-01 93.2% 81.4%
7dluA01 1.10.287.1260 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 36.0 3.66e-01 74.8% 67.6%
1b96A00 3.40.600.10 Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II 0.53 47.0 3.63e-01 100.0% 70.1%
1ad6A00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 38.0 3.14e-01 74.8% 46.5%
1at9A00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 47.0 3.65e-01 100.0% 76.1%
3ermB00 1.10.10.710 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like 0.52 32.0 3.84e-01 71.8% 98.4%
3qxlA00 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.52 43.0 3.35e-01 94.2% 80.4%
1bkjA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.51 42.0 3.23e-01 88.3% 90.0%
3viqA00 6.10.140.1020 Special › Helix non-globular › Helix Hairpins › 0.51 36.0 3.41e-01 100.0% 62.3%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3945698 283.2.1.10 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29514 0.95 74.0 7.45e-01 100.0% 79.8%
3947226 283.2.1.10 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29514 0.82 76.0 7.01e-01 100.0% 83.1%
4988099 283.2.1.10 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29514 0.78 71.0 6.75e-01 100.0% 84.0%
4957559 283.2.1.2 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.71 55.0 5.64e-01 100.0% 86.0%
4346135 3921.1.1.0 ↗ alpha complex topology › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D 0.63 43.0 3.55e-01 77.7% 40.0%
3296105 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.62 44.0 3.16e-01 72.8% 57.3%
3645005 1076.1.1.2 ↗ alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Aph-1 0.59 54.0 4.03e-01 99.0% 81.6%
3311166 208.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.59 41.0 3.37e-01 72.8% 63.6%
4594420 304.12.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.59 43.0 3.23e-01 76.7% 78.8%
5028473 5058.1.1.16 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 0.57 36.0 3.52e-01 73.8% 57.4%
5054424 5058.1.1.2 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st 0.56 35.0 3.94e-01 71.8% 82.5%
4998576 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.55 38.0 4.34e-01 98.1% 100.0%
3470477 1076.1.1.2 ↗ alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Aph-1 0.55 46.0 3.61e-01 94.2% 74.5%
4979325 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.55 41.0 4.30e-01 88.3% 86.3%
3182116 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.55 44.0 3.03e-01 86.4% 41.7%
4592728 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.55 41.0 4.36e-01 92.2% 91.1%
3727211 2011.1.1.6 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.54 48.0 3.48e-01 98.1% 98.2%
3870376 194.1.1.3 ↗ alpha complex topology › Serum albumin-like › Serum albumin-like › Serum albumin-like › ECM1 0.54 40.0 3.68e-01 96.1% 60.0%
185221 3502.1.1.1 ↗ alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein › YebG 0.53 33.0 4.00e-01 74.8% 98.5%
3846390 2008.1.1.84 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Rab15_effector 0.52 46.0 3.70e-01 100.0% 89.8%
3639372 109.4.1.2838 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps53_N, Sec6, VPS53_C 0.52 43.0 2.71e-01 95.1% 39.1%
4929490 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.51 41.0 4.27e-01 92.2% 91.6%
5055207 3843.1.1.0 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.51 39.0 4.26e-01 85.4% 100.0%
3228725 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.51 44.0 2.97e-01 97.1% 54.3%