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OP172637.1__WAX05342.1__AC844P3_00013__00013
Bact-VirOP172637.1__WAX05342.1__AC844P3_00013__00013
Identity
- Accession:
- OP172637 ↗
- Kingdom:
- phage
Quality
72.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-52
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zbdB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.75 | 55.0 | 4.13e-01 | 85.1% | 30.9% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 46.0 | 4.55e-01 | 72.3% | 70.0% |
| 3o58V00 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.67 | 48.0 | 4.58e-01 | 85.1% | 64.4% |
| 1vq8U00 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.66 | 47.0 | 4.55e-01 | 80.9% | 67.9% |
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.65 | 54.0 | 4.58e-01 | 97.9% | 67.5% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 44.0 | 3.59e-01 | 72.3% | 41.2% |
| 1c0gA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.63 | 44.0 | 3.52e-01 | 74.5% | 71.7% |
| 1vx7000 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.63 | 45.0 | 4.21e-01 | 93.6% | 59.7% |
| 5cq2A02 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.60 | 37.0 | 3.82e-01 | 97.9% | 62.8% |
| 5m99A02 | 3.90.400.10 | Alpha Beta › Alpha-Beta Complex › Oligo-1,6-glucosidase; domain 2 › Oligo-1,6-glucosidase; Domain 2 | 0.60 | 42.0 | 3.85e-01 | 74.5% | 64.6% |
| 2lh9A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.59 | 40.0 | 3.43e-01 | 70.2% | 84.6% |
| 5xukA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.59 | 48.0 | 3.63e-01 | 91.5% | 40.9% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.59 | 40.0 | 3.55e-01 | 87.2% | 47.9% |
| 5towB02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 45.0 | 3.10e-01 | 85.1% | 86.3% |
| 2af6A01 | 3.30.70.3180 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 40.0 | 2.96e-01 | 74.5% | 88.5% |
| 1x0tA02 | 6.20.50.20 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.57 | 40.0 | 4.11e-01 | 78.7% | 84.4% |
| 3blzA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 43.0 | 3.32e-01 | 89.4% | 90.3% |
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 40.0 | 2.87e-01 | 76.6% | 40.4% |
| 5a48B00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.56 | 41.0 | 3.27e-01 | 78.7% | 66.7% |
| 1ri9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 46.0 | 3.91e-01 | 91.5% | 89.6% |
| 5suvC00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.55 | 43.0 | 3.34e-01 | 93.6% | 38.4% |
| 4nrvA02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 37.0 | 2.71e-01 | 70.2% | 70.6% |
| 6teyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 38.0 | 3.35e-01 | 72.3% | 68.5% |
| 2dm2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 38.0 | 2.87e-01 | 83.0% | 30.9% |
| 1n8yC02 | 2.10.220.10 | Mainly Beta › Ribbon › Hormone Receptor, Insulin-like Growth Factor Receptor 1; Chain A domain 2 › Hormone Receptor, Insulin-like Growth Factor Receptor 1; Chain A, domain 2 | 0.54 | 37.0 | 2.90e-01 | 87.2% | 29.4% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 37.0 | 3.04e-01 | 72.3% | 68.1% |
| 2nrjA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.54 | 43.0 | 2.68e-01 | 93.6% | 58.5% |
| 4v0bA00 | 3.30.720.210 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.53 | 38.0 | 3.49e-01 | 76.6% | 71.4% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 45.0 | 2.69e-01 | 100.0% | 90.1% |
| 3go5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 42.0 | 3.69e-01 | 95.7% | 62.0% |
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 39.0 | 3.31e-01 | 78.7% | 74.4% |
| 3gwmA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.52 | 41.0 | 3.11e-01 | 91.5% | 71.3% |
| 1afcA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 44.0 | 3.34e-01 | 100.0% | 76.4% |
| 2k4nA00 | 3.30.720.70 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.51 | 39.0 | 3.09e-01 | 89.4% | 70.3% |
| 3kflA02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.51 | 35.0 | 2.73e-01 | 78.7% | 28.1% |
| 1vwxg01 | 6.20.370.70 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.51 | 36.0 | 3.79e-01 | 95.7% | 97.3% |
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.51 | 35.0 | 3.42e-01 | 89.4% | 63.8% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.51 | 39.0 | 2.58e-01 | 89.4% | 45.9% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 37.0 | 3.43e-01 | 85.1% | 74.6% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3522976 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.85 | 64.0 | 5.31e-01 | 85.1% | 47.5% |
| 3254667 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.82 | 57.0 | 6.33e-01 | 78.7% | 100.0% |
| 3175980 | 376.1.1.155 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_Vps41, PF31263 | 0.82 | 64.0 | 5.20e-01 | 91.5% | 47.1% |
| 3172571 | 376.1.1.106 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF29452 | 0.79 | 63.0 | 5.30e-01 | 93.6% | 53.3% |
| 3688382 | 376.1.1.106 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF29452 | 0.76 | 59.0 | 5.60e-01 | 87.2% | 70.9% |
| 4011070 | 376.1.1.106 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF29452 | 0.76 | 61.0 | 5.08e-01 | 100.0% | 51.2% |
| 4996272 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.75 | 57.0 | 5.23e-01 | 85.1% | 63.3% |
| 4988225 | 4187.1.1.2 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › NosL | 0.74 | 63.0 | 4.62e-01 | 97.9% | 36.0% |
| 3647711 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.72 | 60.0 | 5.16e-01 | 97.9% | 60.0% |
| 3552232 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.72 | 55.0 | 3.90e-01 | 91.5% | 27.3% |
| 4852319 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.72 | 52.0 | 4.87e-01 | 83.0% | 63.8% |
| 3786603 | 376.1.1.106 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF29452 | 0.71 | 53.0 | 4.52e-01 | 87.2% | 48.8% |
| 3169402 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.71 | 56.0 | 5.30e-01 | 97.9% | 73.3% |
| 5073214 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.70 | 50.0 | 4.38e-01 | 78.7% | 50.0% |
| 3394478 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.69 | 52.0 | 5.27e-01 | 83.0% | 86.7% |
| 4023822 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.69 | 50.0 | 3.58e-01 | 85.1% | 25.3% |
| 3680502 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.68 | 50.0 | 3.66e-01 | 85.1% | 27.1% |
| 3634792 | 376.1.3.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-PHD-like | 0.68 | 55.0 | 4.59e-01 | 93.6% | 89.4% |
| 5040230 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.67 | 46.0 | 4.09e-01 | 72.3% | 53.8% |
| 3372361 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.67 | 48.0 | 5.04e-01 | 93.6% | 95.0% |
| 3594996 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.66 | 47.0 | 2.90e-01 | 74.5% | 35.8% |
| 3599123 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 46.0 | 2.74e-01 | 74.5% | 40.7% |
| 3498119 | 376.1.3.35 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › LIM | 0.66 | 52.0 | 4.81e-01 | 93.6% | 69.2% |
| 1442743 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.65 | 48.0 | 4.50e-01 | 85.1% | 62.3% |
| 3634154 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.65 | 47.0 | 4.28e-01 | 93.6% | 55.4% |
| 3594561 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 38.0 | 2.34e-01 | 85.1% | 10.2% |
| 3499880 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 47.0 | 3.53e-01 | 100.0% | 30.4% |
| 4978125 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.63 | 44.0 | 4.49e-01 | 72.3% | 77.8% |
| 4887368 | 389.1.1.15 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_MSP1_1 | 0.63 | 38.0 | 3.62e-01 | 89.4% | 46.4% |
| 4964421 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.63 | 43.0 | 3.87e-01 | 72.3% | 53.8% |
| 5051511 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.63 | 48.0 | 4.77e-01 | 89.4% | 82.0% |
| 3504555 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.63 | 52.0 | 4.52e-01 | 100.0% | 58.7% |
| 5024927 | 101.1.2.275 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF1495 | 0.60 | 42.0 | 3.26e-01 | 74.5% | 67.6% |
| 3701251 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.60 | 42.0 | 2.64e-01 | 74.5% | 30.4% |
| 3611867 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.60 | 42.0 | 2.46e-01 | 74.5% | 20.5% |
| 4965712 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.59 | 42.0 | 3.40e-01 | 76.6% | 62.1% |
| 4962688 | 2007.1.5.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › AroM | 0.58 | 43.0 | 3.32e-01 | 80.9% | 33.6% |
| 3284376 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.58 | 42.0 | 3.90e-01 | 83.0% | 84.6% |
| 4882674 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.57 | 36.0 | 4.04e-01 | 70.2% | 100.0% |
| 3907975 | 377.1.1.50 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › ZMYM4 | 0.57 | 40.0 | 4.10e-01 | 83.0% | 82.2% |
| 3253519 | 377.1.1.118 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf_RING_Vps8 | 0.57 | 40.0 | 3.99e-01 | 89.4% | 76.0% |
| 4013543 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.57 | 38.0 | 2.42e-01 | 70.2% | 35.0% |
| 3058078 | 3756.1.1.1 ↗ | a+b complex topology › Diiron beta-hydroxylase CmlA N-terminal domain › Diiron beta-hydroxylase CmlA N-terminal domain › Diiron beta-hydroxylase CmlA N-terminal domain › CmlA_N | 0.57 | 41.0 | 2.61e-01 | 78.7% | 20.5% |
| 3408302 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 42.0 | 3.75e-01 | 78.7% | 92.3% |
| 3638653 | 2003.1.6.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Misat_Tub_SegII+Tubulin_3 | 0.57 | 38.0 | 2.41e-01 | 70.2% | 34.9% |
| 3483191 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 39.0 | 3.76e-01 | 74.5% | 81.8% |
| 3246265 | 6171.1.1.2 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › KDM6_C-hel | 0.56 | 45.0 | 3.14e-01 | 95.7% | 25.1% |
| None | — | 0.56 | 41.0 | 3.68e-01 | 85.1% | 54.3% | |
| 4972761 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 38.0 | 2.51e-01 | 74.5% | 38.2% |
| 3194024 | 2003.1.6.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Misat_Tub_SegII+Tubulin_3 | 0.55 | 38.0 | 2.44e-01 | 70.2% | 28.0% |
| 4563037 | 2003.1.6.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Misat_Tub_SegII+Tubulin_3 | 0.55 | 37.0 | 2.34e-01 | 70.2% | 34.4% |
| 1179312 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.54 | 48.0 | 3.11e-01 | 100.0% | 77.4% |
| 3679306 | 2004.1.1.474 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N, MMR_HSR1 | 0.52 | 38.0 | 2.21e-01 | 78.7% | 9.0% |
| 3255986 | 387.1.3.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like | 0.51 | 34.0 | 3.74e-01 | 87.2% | 94.3% |
| 3386240 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.50 | 39.0 | 2.52e-01 | 93.6% | 68.4% |