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OP172637.1__WAX05354.1__AC844P3_00025__00025

Bact-Vir

OP172637.1__WAX05354.1__AC844P3_00025__00025

Identity

Accession:
OP172637 ↗
Kingdom:
phage

Quality

82.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 27-71
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a6aB01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.79 64.0 5.08e-01 100.0% 44.9%
1rm6A03 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.75 60.0 4.33e-01 91.1% 56.1%
3c19A02 3.10.20.300 Alpha Beta › Roll › Ubiquitin-like (UB roll) › mk0293 like domain 0.73 57.0 4.80e-01 86.7% 71.8%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.71 55.0 3.44e-01 100.0% 15.3%
2yh9B00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.68 54.0 4.73e-01 91.1% 58.8%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 59.0 3.67e-01 100.0% 21.4%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.66 56.0 4.25e-01 100.0% 46.0%
3kd9A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 56.0 3.50e-01 100.0% 21.7%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.65 55.0 4.39e-01 100.0% 48.4%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.65 48.0 4.36e-01 84.4% 72.3%
3cgbA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.65 56.0 4.27e-01 100.0% 50.0%
3icsA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 55.0 3.48e-01 100.0% 21.3%
1yqzA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.64 55.0 4.23e-01 100.0% 50.9%
4fx9A03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.64 55.0 4.16e-01 100.0% 47.8%
1y60A00 3.30.230.60 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Formaldehyde-activating enzyme 0.63 48.0 3.27e-01 84.4% 76.8%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 46.0 3.32e-01 100.0% 25.5%
1nhpA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.62 53.0 4.06e-01 100.0% 46.0%
2qdeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 49.0 3.68e-01 100.0% 69.9%
4ywzB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.61 46.0 3.25e-01 82.2% 27.4%
1dfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 49.0 3.44e-01 100.0% 69.4%
3ro6C01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 48.0 3.89e-01 100.0% 89.6%
4k08A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.60 44.0 3.15e-01 82.2% 27.1%
2cmzA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.59 50.0 4.05e-01 100.0% 51.6%
3hrdC02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.59 51.0 3.92e-01 100.0% 52.2%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.58 48.0 3.41e-01 100.0% 73.9%
1jfrA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 47.0 3.04e-01 100.0% 80.0%
6zj8D01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 43.0 3.27e-01 82.2% 36.0%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.57 45.0 3.41e-01 100.0% 74.3%
2kcjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 3.37e-01 100.0% 37.0%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 46.0 3.38e-01 100.0% 40.3%
3kysA00 2.70.50.80 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › 0.56 44.0 3.00e-01 97.8% 50.0%
3licA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 40.0 2.84e-01 82.2% 23.0%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 48.0 3.74e-01 100.0% 45.6%
3fmcC01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.55 47.0 2.91e-01 100.0% 90.7%
2k4nA00 3.30.720.70 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.55 48.0 3.59e-01 100.0% 45.0%
2e2dC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 44.0 3.69e-01 100.0% 79.8%
3deeA02 3.90.930.50 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.54 40.0 2.99e-01 80.0% 32.5%
2zbbA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 39.0 3.28e-01 80.0% 45.7%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 39.0 3.54e-01 88.9% 56.8%
2pgeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 45.0 3.32e-01 100.0% 99.2%
2z5bB01 3.30.230.90 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.53 44.0 3.41e-01 100.0% 73.9%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 39.0 3.01e-01 100.0% 32.1%
1bf5A04 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 40.0 3.09e-01 91.1% 89.4%
3cawA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 40.0 3.40e-01 100.0% 74.7%
4w9rB01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 38.0 2.53e-01 97.8% 52.8%
1ntyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 41.0 3.11e-01 100.0% 39.5%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4964555 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.74 57.0 5.05e-01 84.4% 86.2%
4982570 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.74 58.0 5.02e-01 86.7% 85.7%
223827 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.73 57.0 4.78e-01 86.7% 70.9%
4929236 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.73 57.0 4.92e-01 86.7% 85.7%
3972141 881.1.1.25 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF4946 0.72 62.0 4.31e-01 100.0% 79.4%
4960997 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.72 61.0 5.20e-01 93.3% 84.3%
4935912 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.72 61.0 5.20e-01 93.3% 84.3%
4013174 243.1.1.83 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26061 0.71 57.0 3.81e-01 91.1% 84.9%
5031772 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.69 60.0 5.01e-01 95.6% 78.7%
3960045 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.69 55.0 4.40e-01 88.9% 50.0%
4240251 246.1.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.69 59.0 3.54e-01 100.0% 15.7%
5076192 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.68 57.0 4.86e-01 93.3% 79.7%
3586665 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.67 47.0 4.47e-01 100.0% 61.8%
3989767 2008.1.1.152 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF2130 0.66 57.0 3.84e-01 100.0% 64.4%
4436313 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.66 51.0 4.07e-01 84.4% 45.6%
3544903 5.1.4.13 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP 0.66 53.0 3.13e-01 95.6% 21.7%
4994741 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.66 58.0 4.20e-01 100.0% 39.1%
5042623 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.66 56.0 4.12e-01 100.0% 42.4%
3587535 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.65 56.0 4.19e-01 100.0% 45.8%
4024732 295.1.1.40 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Microp_apicomplexa_10 0.65 51.0 4.30e-01 95.6% 50.0%
416354 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.64 53.0 4.02e-01 100.0% 75.2%
4951490 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.64 46.0 3.57e-01 82.2% 35.0%
4356796 1001.1.1.1 a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 0.62 49.0 4.27e-01 86.7% 72.9%
3602976 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 48.0 4.55e-01 100.0% 70.9%
4345682 223.1.1.97 a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_2 0.62 46.0 3.04e-01 82.2% 19.5%
3094740 220.1.1.14 beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.62 51.0 3.76e-01 100.0% 36.4%
1174496 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.61 51.0 3.91e-01 100.0% 82.1%
5049952 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.60 44.0 3.42e-01 82.2% 34.3%
3538086 385.1.1.1 few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › Cys_knot 0.60 51.0 4.15e-01 100.0% 51.1%
3645375 386.1.1.117 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 0.60 43.0 3.49e-01 100.0% 38.3%
4547017 109.3.1.99 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2+Ank_5 0.60 44.0 2.86e-01 95.6% 15.5%
5005640 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.60 52.0 4.59e-01 97.8% 86.2%
4972327 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.60 52.0 4.10e-01 100.0% 56.8%
3269109 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.59 48.0 3.27e-01 100.0% 26.2%
3700176 219.1.1.91 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › EDR1 0.59 50.0 3.42e-01 100.0% 26.3%
3995776 330.3.1.0 a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like 0.58 47.0 3.92e-01 97.8% 58.9%
5046498 219.1.1.51 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.57 48.0 3.28e-01 100.0% 26.7%
3391411 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 42.0 4.33e-01 82.2% 92.5%
3498392 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 48.0 3.62e-01 100.0% 47.1%
3989498 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.57 41.0 3.56e-01 80.0% 50.0%
185160 3551.1.1.1 alpha arrays › Pfam family PF09836 C-terminal domain › Pfam family PF09836 C-terminal domain › Pfam family PF09836 C-terminal domain › NGO1945_C 0.55 41.0 3.08e-01 80.0% 33.3%
3917310 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.55 45.0 4.15e-01 100.0% 73.8%
2494924 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.55 46.0 3.99e-01 100.0% 61.5%
3501287 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 38.0 3.95e-01 82.2% 87.5%
2574432 1001.1.1.5 a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Rieske_3 0.55 47.0 3.50e-01 100.0% 84.3%
3665275 2004.1.1.187 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta2 0.53 45.0 3.00e-01 100.0% 49.5%
4418704 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.53 42.0 3.06e-01 95.6% 46.5%
2041633 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.52 42.0 3.95e-01 100.0% 73.3%
337177 218.1.1.6 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › OSBS_N 0.51 40.0 3.49e-01 100.0% 81.9%
3928361 220.1.1.46 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.51 39.0 2.90e-01 100.0% 29.3%
4998245 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.51 40.0 2.93e-01 97.8% 37.4%
349159 913.1.1.1 few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › HRM 0.51 37.0 3.29e-01 88.9% 53.8%