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OP172638.1__WAX05392.1__AD70P2_00004__00004

Bact-Vir

OP172638.1__WAX05392.1__AD70P2_00004__00004

Identity

Accession:
OP172638 ↗
Kingdom:
phage

Quality

75.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Guelinviridae› Amedibacillus_phage_AD70P2

TaxID: 2968530

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 57-131
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fouA02 2.40.500.10 Mainly Beta › Beta Barrel › Upper collar protein gp10 (connector protein) fold › Upper collar protein gp10 (connector protein) 0.85 79.0 6.39e-01 100.0% 61.4%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 42.0 4.74e-01 73.3% 83.9%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 43.0 4.59e-01 78.7% 93.5%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 40.0 4.11e-01 72.0% 75.7%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.57 36.0 4.13e-01 76.0% 94.0%
2avwD01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 41.0 3.51e-01 81.3% 75.9%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 36.0 3.83e-01 77.3% 77.3%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 39.0 4.19e-01 77.3% 100.0%
1xezA04 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.54 41.0 3.40e-01 81.3% 96.3%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 41.0 2.70e-01 82.7% 24.3%
3db0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 38.0 3.29e-01 76.0% 49.2%
3h7oA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 42.0 3.70e-01 85.3% 86.6%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.54 43.0 3.18e-01 94.7% 56.9%
2ol5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 41.0 3.13e-01 82.7% 56.8%
1q57G01 2.20.25.180 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.53 38.0 3.84e-01 76.0% 82.2%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 38.0 4.02e-01 77.3% 89.7%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 3.79e-01 74.7% 84.5%
3u5wA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 39.0 3.36e-01 81.3% 69.8%
3hrpA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 32.0 3.05e-01 76.0% 49.5%
2b0uD02 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.52 27.0 2.79e-01 70.7% 50.0%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.52 40.0 4.11e-01 92.0% 87.8%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.51 39.0 3.22e-01 82.7% 73.2%
1d4cA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 44.0 2.96e-01 100.0% 72.2%
1ju2A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 43.0 2.90e-01 100.0% 87.0%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3512902 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.63 41.0 4.56e-01 72.0% 90.9%
3581817 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.61 42.0 4.41e-01 70.7% 87.7%
3880508 4.1.1.129 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_5 0.61 41.0 3.85e-01 74.7% 55.8%
3741020 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 40.0 4.18e-01 74.7% 75.7%
4158712 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 39.0 4.04e-01 73.3% 72.9%
4386702 219.1.1.45 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Mac-1 0.59 47.0 3.25e-01 92.0% 77.6%
4990487 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.59 41.0 4.20e-01 74.7% 77.1%
3616769 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.59 40.0 3.81e-01 73.3% 58.9%
4252954 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.58 40.0 4.13e-01 72.0% 78.6%
5035835 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.58 40.0 4.34e-01 74.7% 90.0%
4120629 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.58 44.0 4.43e-01 81.3% 92.0%
3721062 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.57 39.0 3.80e-01 70.7% 80.0%
3959055 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.57 38.0 4.09e-01 72.0% 81.2%
4943273 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 38.0 4.06e-01 73.3% 81.5%
3974799 1.1.5.18 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 0.56 41.0 3.07e-01 77.3% 43.5%
4029154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 41.0 3.61e-01 78.7% 73.1%
4400642 4.1.1.257 ↗ beta barrels › SH3 › SH3 › SH3 › Flag1_repress 0.56 38.0 3.65e-01 77.3% 61.2%
5022848 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 38.0 4.15e-01 74.7% 90.0%
3612090 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 40.0 4.26e-01 77.3% 95.0%
4593997 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 38.0 3.99e-01 73.3% 81.5%
4540843 4.1.1.434 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2642 0.55 36.0 3.79e-01 77.3% 75.4%
4879299 219.1.1.45 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Mac-1 0.55 43.0 3.21e-01 90.7% 61.6%
4629735 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 38.0 4.01e-01 74.7% 83.1%
4031510 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 38.0 3.64e-01 73.3% 61.1%
3408330 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 44.0 4.05e-01 89.3% 81.0%
4300449 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.55 37.0 3.96e-01 73.3% 83.1%
3942573 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 39.0 4.26e-01 82.7% 100.0%
3794500 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.54 44.0 3.41e-01 93.3% 72.4%
3448975 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.54 37.0 3.94e-01 73.3% 90.8%
5043802 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 43.0 3.85e-01 92.0% 76.5%
5015352 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 39.0 3.84e-01 78.7% 73.5%
3260945 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 36.0 3.97e-01 81.3% 90.0%
4139090 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.52 35.0 3.86e-01 77.3% 92.7%
5053906 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.52 36.0 3.87e-01 77.3% 90.0%
3301015 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 37.0 3.96e-01 81.3% 90.8%
3506893 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.52 40.0 2.76e-01 86.7% 48.5%
3598499 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 39.0 3.34e-01 88.0% 97.1%
3721787 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 37.0 3.57e-01 77.3% 80.0%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.51 35.0 3.61e-01 72.0% 77.1%
3408588 4.1.1.243 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.50 40.0 4.11e-01 89.3% 95.7%
4514731 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 38.0 3.67e-01 81.3% 76.5%
D2 medium residues 248-288
PDB
Domain cluster: representative