←Back to structures

OP172672.1__WAX07111.1__BF503P4_00043__00043

Bact-Vir

OP172672.1__WAX07111.1__BF503P4_00043__00043

Identity

Accession:
OP172672 ↗
Kingdom:
phage

Quality

91.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacteroides_phage_BF503P4

TaxID: 2968555

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-108
PDB
Domain cluster: rep: OP172676.1__WAX07373.1__BF698P3_00063__00063__D18-116
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.79 42.0 5.15e-01 97.1% 83.1%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.75 41.0 5.28e-01 98.1% 96.5%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.73 38.0 4.96e-01 70.2% 89.8%
1lshA03 2.20.50.20 Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 0.63 46.0 4.78e-01 79.8% 81.6%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.61 40.0 3.62e-01 76.0% 48.2%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.60 52.0 4.35e-01 100.0% 82.4%
2chcC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 49.0 4.25e-01 89.4% 95.6%
4wksC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.59 30.0 3.38e-01 73.1% 62.7%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.59 38.0 3.97e-01 76.9% 70.4%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.58 40.0 3.84e-01 84.6% 60.2%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 47.0 4.32e-01 100.0% 65.9%
2p0wA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 50.0 4.64e-01 94.2% 85.0%
3kkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 34.0 3.07e-01 82.7% 42.4%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.58 45.0 3.92e-01 81.7% 71.0%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.57 43.0 3.28e-01 79.8% 47.2%
6nvxB02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.57 29.0 3.30e-01 73.1% 62.3%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.57 51.0 3.79e-01 100.0% 79.2%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.56 48.0 3.41e-01 91.3% 43.9%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.56 41.0 2.95e-01 76.0% 42.9%
1h54B01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.55 43.0 3.28e-01 87.5% 92.2%
1rm6D04 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.54 49.0 3.78e-01 100.0% 62.7%
1uliB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 45.0 3.79e-01 90.4% 97.2%
4i0nA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.54 47.0 3.54e-01 98.1% 94.7%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.54 42.0 3.77e-01 83.7% 69.4%
2nlvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.53 36.0 3.56e-01 91.3% 64.3%
1kyfA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.53 38.0 3.74e-01 91.3% 69.0%
3he1A00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.53 40.0 3.53e-01 78.8% 86.4%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.53 44.0 3.92e-01 100.0% 62.6%
4l8oA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 3.45e-01 80.8% 82.3%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.52 35.0 3.54e-01 91.3% 68.3%
5i97C00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.51 36.0 3.35e-01 74.0% 99.3%
1dwnA00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.51 37.0 3.51e-01 77.9% 62.2%
3hi7B02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 33.0 3.09e-01 86.5% 52.3%
2rgqB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.69e-01 83.7% 99.2%
1dpgA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 41.0 2.99e-01 88.5% 58.9%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 35.0 3.35e-01 73.1% 94.5%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.50 45.0 3.59e-01 99.0% 70.7%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3878529 243.1.1.41 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Coa1 0.78 41.0 4.04e-01 70.2% 48.2%
4797813 271.1.1.1 ↗ beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.75 41.0 5.28e-01 98.1% 96.5%
4332907 5087.3.1.1 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht 0.65 47.0 3.18e-01 79.8% 21.4%
4933294 230.1.1.5 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.64 44.0 4.16e-01 71.2% 100.0%
4361209 7026.1.1.13 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › Hobbit 0.64 50.0 3.98e-01 82.7% 50.5%
3847303 5084.5.1.67 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Hobbit 0.64 50.0 4.03e-01 82.7% 67.4%
3539661 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.63 57.0 4.53e-01 100.0% 74.8%
4443818 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.62 47.0 3.09e-01 80.8% 21.4%
3961200 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.61 46.0 4.21e-01 78.8% 93.3%
1102013 883.1.1.1 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.61 55.0 4.41e-01 100.0% 74.4%
3608173 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 40.0 2.75e-01 95.2% 18.7%
3508261 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.61 54.0 4.26e-01 100.0% 66.2%
3626832 883.1.1.15 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C 0.60 54.0 3.59e-01 100.0% 34.6%
3580808 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.60 54.0 4.05e-01 100.0% 63.8%
3504023 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.60 53.0 4.07e-01 100.0% 66.0%
6402 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.60 49.0 4.22e-01 89.4% 92.8%
3836667 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.59 53.0 4.15e-01 100.0% 71.1%
3175463 7026.1.1.5 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD 0.59 48.0 3.78e-01 87.5% 48.4%
3789884 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.59 53.0 4.09e-01 100.0% 64.3%
3484227 4051.1.1.0 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.59 43.0 3.67e-01 76.9% 48.2%
4969760 230.1.1.5 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.59 40.0 3.78e-01 70.2% 93.8%
3506845 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.58 51.0 3.91e-01 100.0% 64.8%
3923837 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.57 50.0 3.31e-01 100.0% 36.9%
3622176 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.56 50.0 3.31e-01 100.0% 34.0%
3936894 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.56 49.0 3.88e-01 100.0% 64.3%
4026006 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 34.0 3.80e-01 74.0% 78.8%
3922213 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.56 49.0 3.80e-01 100.0% 66.1%
3677000 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 42.0 3.70e-01 79.8% 56.0%
4942259 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.55 45.0 4.12e-01 87.5% 72.6%
3792778 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.55 49.0 3.20e-01 100.0% 36.6%
3250542 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.55 39.0 3.99e-01 100.0% 76.0%
2163476 1053.1.1.1 ↗ beta barrels › Factor H-binding protein (fHbp) N-terminal beta-barrel domain › Factor H-binding protein (fHbp) N-terminal beta-barrel domain › Factor H-binding protein (fHbp) N-terminal beta-barrel domain › FHBP_N 0.53 47.0 4.30e-01 100.0% 97.9%
3499841 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 30.0 3.24e-01 71.2% 63.3%
3394051 12.2.1.4 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Vanin_C 0.53 41.0 3.41e-01 82.7% 86.3%
3278413 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.53 39.0 3.60e-01 78.8% 96.4%
3509197 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 32.0 3.55e-01 86.5% 75.3%
4927368 243.3.1.52 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › UPF0182 0.52 44.0 2.86e-01 95.2% 22.3%
4934627 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 34.0 3.35e-01 79.8% 60.9%
3846048 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.52 46.0 3.73e-01 100.0% 59.0%
3729636 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.51 41.0 3.23e-01 88.5% 75.3%
4024473 243.3.1.20 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › AKAP28 0.51 36.0 3.52e-01 75.0% 65.8%
3525853 883.1.1.1 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.51 36.0 3.25e-01 74.0% 60.7%
3730094 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.50 37.0 2.58e-01 76.9% 72.3%
3181187 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.50 42.0 2.62e-01 97.1% 52.7%
4668983 4051.1.1.0 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.50 39.0 3.41e-01 83.7% 68.1%