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OP172705.1__WAX08741.1__BP742P1_00008__00008

Bact-Vir

OP172705.1__WAX08741.1__BP742P1_00008__00008

Identity

Accession:
OP172705 ↗
Kingdom:
phage

Quality

69.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-54
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ld1A00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.70 47.0 3.31e-01 70.8% 33.1%
3da7E00 3.40.20.20 Alpha Beta › 3-Layer(aba) Sandwich › Severin › 0.70 61.0 4.78e-01 100.0% 80.6%
4o2wD00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.69 60.0 3.57e-01 100.0% 45.3%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.68 58.0 4.44e-01 100.0% 53.4%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.68 58.0 4.33e-01 100.0% 48.4%
4l1mB00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.68 57.0 3.48e-01 100.0% 46.8%
1x5eA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.67 48.0 3.74e-01 79.2% 83.5%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.66 51.0 4.54e-01 85.4% 73.9%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 57.0 3.42e-01 100.0% 29.7%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.65 46.0 3.10e-01 75.0% 22.3%
4g7nA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.65 55.0 4.15e-01 97.9% 85.1%
2jozA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 55.0 4.49e-01 100.0% 95.8%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.64 47.0 3.74e-01 81.2% 49.5%
1pguA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 54.0 3.31e-01 100.0% 30.2%
3odtA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 53.0 3.32e-01 100.0% 42.9%
1sjiA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 48.0 3.64e-01 85.4% 80.6%
1xeaA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.63 45.0 3.03e-01 77.1% 22.4%
2x8fA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 50.0 3.08e-01 91.7% 31.4%
2ovrB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 53.0 3.24e-01 100.0% 27.7%
4le7A02 2.90.10.10 Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain 0.63 45.0 3.89e-01 79.2% 74.4%
1tltA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.62 44.0 3.01e-01 77.1% 23.1%
3aihB01 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.62 51.0 4.06e-01 97.9% 98.1%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.61 45.0 3.56e-01 81.2% 48.6%
2hzmA02 2.20.140.20 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › 0.61 50.0 4.30e-01 97.9% 92.9%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 52.0 3.76e-01 100.0% 63.9%
7jl1B01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.60 51.0 3.67e-01 100.0% 66.9%
6m90A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 51.0 3.17e-01 100.0% 32.2%
2ymsC00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 46.0 4.10e-01 87.5% 82.7%
4wvmA04 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.60 50.0 3.43e-01 100.0% 57.7%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 51.0 3.07e-01 100.0% 33.1%
4immA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 49.0 3.00e-01 100.0% 25.7%
4hdjA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 49.0 2.98e-01 100.0% 23.7%
7apkF01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 48.0 2.98e-01 100.0% 32.9%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.58 48.0 4.29e-01 97.9% 72.6%
4paaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 42.0 2.68e-01 79.2% 18.0%
4cswA02 3.40.366.30 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 0.58 48.0 3.32e-01 95.8% 47.7%
5hp6A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 48.0 2.93e-01 97.9% 23.0%
2ymsA00 2.40.128.630 Mainly Beta › Beta Barrel › Lipocalin › 0.57 48.0 3.65e-01 100.0% 72.6%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 45.0 2.81e-01 91.7% 94.7%
2ymsB00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 45.0 3.99e-01 93.8% 82.4%
4g7nA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.56 46.0 3.76e-01 97.9% 75.3%
4gp0B02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 44.0 3.47e-01 100.0% 96.7%
5kmpB00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.55 44.0 2.64e-01 93.8% 37.5%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.67e-01 100.0% 82.3%
1r26A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 40.0 3.18e-01 85.4% 85.0%
3qr8A02 6.20.150.10 Special › Other non-globular › Chondroitinase Ac; Chain A, domain 3 › 0.53 36.0 3.15e-01 70.8% 53.4%
6g62A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 40.0 3.10e-01 85.4% 88.7%
3d6wB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 38.0 3.57e-01 89.6% 61.4%
1flgA00 2.140.10.10 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily 0.52 41.0 2.39e-01 100.0% 24.7%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 40.0 3.69e-01 87.5% 89.4%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.52 42.0 2.91e-01 100.0% 70.8%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 37.0 2.69e-01 85.4% 26.8%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 3.92e-01 100.0% 83.9%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3384946 5.1.10.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › RCC1, RCC1_2 0.77 53.0 3.81e-01 72.9% 36.3%
360741 234.1.1.1 a+b two layers › Microbial ribonucleases-like › Microbial ribonucleases › Microbial ribonucleases › Ribonuclease 0.70 62.0 4.84e-01 100.0% 79.4%
4014850 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 58.0 3.43e-01 100.0% 41.2%
4002544 5.1.4.298 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.69 53.0 3.01e-01 97.9% 7.2%
3386275 809.2.1.1 a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like 0.69 46.0 4.35e-01 75.0% 56.7%
3649906 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.69 53.0 4.34e-01 87.5% 81.1%
3435779 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.68 47.0 4.53e-01 75.0% 63.6%
5048065 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.68 50.0 4.00e-01 79.2% 48.0%
3787070 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.68 57.0 3.35e-01 100.0% 37.3%
3777884 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.67 50.0 3.65e-01 81.2% 71.9%
3400750 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.67 50.0 3.16e-01 81.2% 36.1%
3741619 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.66 55.0 3.26e-01 100.0% 41.0%
3619994 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.66 49.0 3.58e-01 81.2% 72.3%
4049822 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.65 54.0 3.23e-01 100.0% 43.6%
3993452 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.64 47.0 3.61e-01 81.2% 81.7%
3497363 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.64 47.0 3.60e-01 79.2% 84.5%
4507299 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.64 54.0 3.22e-01 100.0% 41.8%
3660758 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.63 54.0 3.89e-01 97.9% 74.5%
3903430 220.1.1.123 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.63 47.0 3.99e-01 83.3% 49.4%
3806989 5.1.5.66 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.63 53.0 3.36e-01 100.0% 42.1%
4959079 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.63 54.0 3.04e-01 100.0% 15.7%
3705932 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 51.0 3.11e-01 100.0% 18.7%
3900771 330.9.1.0 a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p 0.62 42.0 3.94e-01 72.9% 56.7%
4990390 3504.3.1.0 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain 0.61 46.0 3.41e-01 100.0% 29.6%
5015183 7528.1.1.0 a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains 0.61 43.0 3.40e-01 77.1% 73.6%
3578914 5.1.5.170 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › B-prop_COPA_B_2nd 0.61 52.0 3.29e-01 100.0% 49.3%
4112122 386.1.1.81 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF1391 0.61 38.0 4.08e-01 72.9% 75.0%
4302938 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.61 51.0 4.31e-01 100.0% 55.3%
3264768 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 51.0 3.14e-01 100.0% 27.6%
5055345 5.1.5.162 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_ACSF4 0.61 51.0 3.11e-01 100.0% 39.7%
5004274 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.61 46.0 4.02e-01 83.3% 57.3%
4773067 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.60 46.0 4.10e-01 87.5% 82.7%
3915603 5.1.3.225 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40, Beta-prop_SCAP 0.60 51.0 2.93e-01 100.0% 40.6%
4951953 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.60 42.0 2.86e-01 77.1% 20.0%
3880745 5.1.3.187 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › KNTC1_N 0.60 50.0 3.00e-01 100.0% 25.7%
4162022 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.59 44.0 3.77e-01 89.6% 47.5%
3624687 64.1.1.9 beta meanders › WW domain-like › WW domain › WW domain › WW_TCERG1 0.59 48.0 4.76e-01 91.7% 98.0%
3613182 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 49.0 2.93e-01 100.0% 36.2%
4027260 5.1.4.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD 0.59 49.0 3.10e-01 100.0% 27.0%
5009920 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.59 50.0 3.08e-01 100.0% 25.1%
3404395 5.1.3.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SGL, SSL_N 0.58 48.0 2.90e-01 100.0% 27.6%
3552883 64.1.1.9 beta meanders › WW domain-like › WW domain › WW domain › WW_TCERG1 0.58 49.0 4.32e-01 97.9% 70.7%
3924403 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 49.0 3.05e-01 100.0% 29.4%
3335113 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.58 41.0 3.48e-01 79.2% 83.3%
3997581 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 49.0 2.99e-01 100.0% 30.0%
4960280 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 48.0 3.98e-01 100.0% 65.3%
4946341 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.57 48.0 3.10e-01 97.9% 26.1%
4661567 5.1.4.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ,PQQ_2 0.57 46.0 2.85e-01 100.0% 25.1%
4392263 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.56 46.0 2.84e-01 100.0% 25.4%
4547187 5.1.5.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ,PQQ_2 0.56 46.0 2.61e-01 100.0% 30.5%
3679910 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.56 48.0 3.17e-01 97.9% 25.7%
3212890 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.56 46.0 2.98e-01 100.0% 39.1%
3662916 5.3.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop 0.56 45.0 3.38e-01 100.0% 79.3%
4773066 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.56 45.0 3.99e-01 93.8% 82.4%
2527301 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.55 42.0 3.32e-01 85.4% 86.5%
4009148 292.2.1.14 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › SWIM 0.55 44.0 3.69e-01 100.0% 50.0%
3236014 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 46.0 2.82e-01 100.0% 98.2%
3474880 331.23.1.0 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain 0.53 39.0 3.18e-01 79.2% 45.6%
3285378 220.1.1.221 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF3093 0.53 40.0 3.36e-01 93.8% 89.5%
429187 330.9.1.1 a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p › Tnp_22_dsRBD 0.53 37.0 3.28e-01 75.0% 70.1%
4964361 502.1.1.3 a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › DUF7348 0.53 45.0 4.04e-01 100.0% 78.6%
3338669 64.1.1.1 beta meanders › WW domain-like › WW domain › WW domain › WW 0.53 40.0 3.93e-01 97.9% 78.2%