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OP172706.1__WAX08812.1__BS162P1_00033__00033
Bact-VirOP172706.1__WAX08812.1__BS162P1_00033__00033
Identity
- Accession:
- OP172706 ↗
- Kingdom:
- phage
Quality
77.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-68
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6b9tF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.76 | 67.0 | 5.09e-01 | 100.0% | 47.7% |
| 1u0tA02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.73 | 50.0 | 3.60e-01 | 72.3% | 25.5% |
| 2q30A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.71 | 61.0 | 5.02e-01 | 100.0% | 56.8% |
| 2i45D00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.71 | 62.0 | 4.87e-01 | 100.0% | 50.5% |
| 2vpvA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 60.0 | 4.84e-01 | 100.0% | 54.3% |
| 4qmaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 59.0 | 4.27e-01 | 100.0% | 45.5% |
| 2pytA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 60.0 | 4.42e-01 | 100.0% | 38.3% |
| 3d82A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 59.0 | 4.68e-01 | 100.0% | 48.0% |
| 3eo6A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 58.0 | 4.59e-01 | 100.0% | 48.1% |
| 4indA01 | 2.60.120.1320 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 54.0 | 4.01e-01 | 100.0% | 42.5% |
| 1pmiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 56.0 | 3.83e-01 | 100.0% | 25.9% |
| 1jb0D00 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.66 | 52.0 | 3.95e-01 | 100.0% | 41.3% |
| 7zvmA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 55.0 | 4.40e-01 | 100.0% | 50.0% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 54.0 | 4.89e-01 | 97.9% | 89.7% |
| 2zuoA09 | 2.30.30.570 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 51.0 | 4.77e-01 | 93.6% | 95.2% |
| 1v70A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 53.0 | 4.26e-01 | 100.0% | 48.6% |
| 3myxB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 54.0 | 4.09e-01 | 100.0% | 41.0% |
| 2opkB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 52.0 | 4.34e-01 | 100.0% | 57.4% |
| 6njyA01 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 52.0 | 3.99e-01 | 100.0% | 100.0% |
| 5by5A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 50.0 | 3.99e-01 | 100.0% | 44.3% |
| 1gqgC01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 49.0 | 3.68e-01 | 100.0% | 79.3% |
| 2jdaB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 47.0 | 3.54e-01 | 100.0% | 52.8% |
| 7trwA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 49.0 | 3.91e-01 | 100.0% | 94.1% |
| 1y7xA01 | 2.30.30.550 | Mainly Beta › Roll › SH3 type barrels. › Major Vault Protein repeat | 0.57 | 45.0 | 4.51e-01 | 100.0% | 87.2% |
| 5h5oA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 47.0 | 3.58e-01 | 100.0% | 45.6% |
| 2d93A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 45.0 | 3.46e-01 | 100.0% | 43.3% |
| 6m3aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.67e-01 | 89.4% | 92.4% |
| 5eo9B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.41e-01 | 100.0% | 50.5% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3610322 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.75 | 61.0 | 5.71e-01 | 100.0% | 73.3% |
| 3265780 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.72 | 59.0 | 5.54e-01 | 100.0% | 75.0% |
| 4932084 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.71 | 60.0 | 6.00e-01 | 100.0% | 96.0% |
| 4994655 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.71 | 60.0 | 5.93e-01 | 100.0% | 98.0% |
| 3977412 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.70 | 57.0 | 5.74e-01 | 97.9% | 100.0% |
| 3677913 | 10.12.1.144 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C, PMI_typeI_cat | 0.70 | 59.0 | 3.75e-01 | 100.0% | 20.4% |
| 3651516 | 10.12.1.5 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C | 0.69 | 59.0 | 4.71e-01 | 100.0% | 53.0% |
| 3270284 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.69 | 57.0 | 5.42e-01 | 100.0% | 80.0% |
| 3288347 | 10.12.1.85 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_6 | 0.69 | 58.0 | 4.05e-01 | 100.0% | 30.2% |
| 3714898 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.68 | 57.0 | 5.39e-01 | 100.0% | 78.3% |
| 3605089 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.68 | 57.0 | 5.38e-01 | 100.0% | 78.3% |
| 4038262 | 10.12.1.35 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ppnp | 0.66 | 55.0 | 4.49e-01 | 100.0% | 51.5% |
| 3253382 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 55.0 | 4.17e-01 | 93.6% | 74.8% |
| 5004168 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 51.0 | 3.93e-01 | 89.4% | 68.2% |
| 4649321 | 865.1.1.1 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › B3_4 | 0.63 | 53.0 | 3.59e-01 | 100.0% | 85.5% |
| 3480053 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.60 | 40.0 | 2.68e-01 | 70.2% | 92.7% |
| 5045979 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.59 | 47.0 | 3.06e-01 | 100.0% | 36.3% |
| 3592030 | 304.102.1.0 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase | 0.59 | 46.0 | 2.98e-01 | 100.0% | 27.8% |
| 5037411 | 304.22.1.0 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain | 0.57 | 46.0 | 3.74e-01 | 95.7% | 94.0% |
| 3606397 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.57 | 43.0 | 4.07e-01 | 100.0% | 87.1% |
| 3779679 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.56 | 46.0 | 2.90e-01 | 97.9% | 19.7% |
| 3532264 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.56 | 46.0 | 3.34e-01 | 97.9% | 40.0% |
| 3226649 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 46.0 | 3.15e-01 | 97.9% | 31.0% |
| 3916871 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 46.0 | 3.39e-01 | 97.9% | 42.8% |
| None | — | 0.55 | 44.0 | 3.46e-01 | 100.0% | 44.5% | |
| 3919483 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 45.0 | 2.83e-01 | 97.9% | 18.4% |
| 5071541 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 42.0 | 3.39e-01 | 95.7% | 83.6% |
| 5041941 | 11.1.1.531 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 | 0.54 | 42.0 | 3.35e-01 | 95.7% | 79.1% |
| 3494269 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 43.0 | 2.70e-01 | 100.0% | 16.8% |
| 3492162 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.53 | 44.0 | 3.23e-01 | 97.9% | 41.3% |
| 5072652 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 3.37e-01 | 97.9% | 85.5% |
| 3403797 | 10.12.1.97 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CNBH_CNNM2_C | 0.51 | 42.0 | 2.95e-01 | 100.0% | 42.6% |
| 4968152 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.25e-01 | 97.9% | 84.5% |