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OP172706.1__WAX08819.1__BS162P1_00040__00040
Bact-VirOP172706.1__WAX08819.1__BS162P1_00040__00040
Identity
- Accession:
- OP172706 ↗
- Kingdom:
- phage
Quality
90.1
mean pLDDT
Cluster
View cluster (40 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-102
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mzkB03 | 1.20.58.940 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 28.0 | 3.28e-01 | 90.8% | 64.3% |
| 1bc0A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.57 | 31.0 | 3.34e-01 | 96.9% | 60.5% |
| 1d1dA01 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.56 | 33.0 | 2.92e-01 | 92.9% | 39.3% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.56 | 25.0 | 3.25e-01 | 93.9% | 72.7% |
| 4uzzB00 | 6.10.250.2800 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 33.0 | 3.85e-01 | 78.6% | 89.2% |
| 4bjtA02 | 1.10.10.2170 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 28.0 | 3.54e-01 | 90.8% | 92.0% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 31.0 | 3.44e-01 | 100.0% | 72.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 333304 | 6050.1.1.1 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage_TAC_1 | 0.68 | 53.0 | 5.21e-01 | 100.0% | 77.9% |
| 3796257 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.51 | 36.0 | 3.07e-01 | 72.4% | 92.7% |
| 1229685 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.51 | 36.0 | 3.01e-01 | 72.4% | 94.3% |
D2
medium
residues 106-133_266-289
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.69 | 50.0 | 4.90e-01 | 94.2% | 73.2% |
| 1dfxA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.56 | 39.0 | 3.04e-01 | 98.1% | 31.2% |
| 5yvxA00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.55 | 38.0 | 3.64e-01 | 73.1% | 73.3% |
| 1wevA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 39.0 | 3.74e-01 | 78.8% | 67.2% |
| 7wlvF02 | 3.30.2090.10 | Alpha Beta › 2-Layer Sandwich › Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains › Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains | 0.52 | 41.0 | 3.53e-01 | 94.2% | 88.0% |
| 2d5wA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.51 | 35.0 | 2.85e-01 | 75.0% | 90.6% |
| 1g8kC01 | 2.60.40.4210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 38.0 | 3.15e-01 | 90.4% | 82.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5000687 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 64.0 | 6.17e-01 | 96.2% | 84.5% |
| 3440950 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.66 | 47.0 | 5.10e-01 | 82.7% | 100.0% |
| 5028378 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 51.0 | 5.37e-01 | 90.4% | 100.0% |
| 5048873 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 52.0 | 5.19e-01 | 94.2% | 92.7% |
| 4944757 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 48.0 | 5.08e-01 | 92.3% | 100.0% |
| 3588036 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 48.0 | 4.77e-01 | 86.5% | 80.0% |
| 5020208 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 51.0 | 5.18e-01 | 92.3% | 100.0% |
| 4526174 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 44.0 | 4.56e-01 | 82.7% | 93.3% |
| 3179152 | 375.1.1.25 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tfb4 | 0.59 | 47.0 | 4.47e-01 | 92.3% | 73.8% |
| 3703311 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 46.0 | 4.67e-01 | 100.0% | 98.0% |
| 4027923 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 44.0 | 2.51e-01 | 96.2% | 15.2% |
| 4940877 | 377.1.1.130 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf_Tbcl_2 | 0.53 | 35.0 | 3.95e-01 | 78.8% | 100.0% |
| 3732556 | 376.1.1.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › FANCL_C | 0.52 | 42.0 | 3.69e-01 | 96.2% | 68.2% |
| 5038628 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.52 | 40.0 | 3.18e-01 | 96.2% | 38.5% |
| 3668092 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 44.0 | 4.25e-01 | 100.0% | 96.7% |
| 4057017 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 35.0 | 2.93e-01 | 76.9% | 42.9% |
D3
medium
residues 147-261
Domain cluster:
rep: MK388859.1__QBA84982.1__X__00041__D2-102
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fgxA00 | 3.30.2220.10 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171 | 0.70 | 46.0 | 4.98e-01 | 100.0% | 79.2% |
| 2ob9A00 | 3.30.2220.20 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like | 0.63 | 47.0 | 4.88e-01 | 100.0% | 84.1% |
| 4epcA01 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 34.0 | 3.90e-01 | 93.0% | 93.8% |
| 1yf9A00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 34.0 | 3.05e-01 | 87.8% | 48.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 333304 | 6050.1.1.1 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage_TAC_1 | 0.69 | 48.0 | 5.04e-01 | 100.0% | 79.8% |
| 5067289 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.55 | 31.0 | 3.61e-01 | 78.3% | 77.5% |