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OP172706.1__WAX08865.1__BS162P1_00086__00086
Bact-VirOP172706.1__WAX08865.1__BS162P1_00086__00086
Identity
- Accession:
- OP172706 ↗
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Cluster
View cluster (17 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-135
Domain cluster:
rep: MW824377.1__QZI87583.1__MYOV011v1_p0316__00315__D3-131
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nd5A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.67 | 52.0 | 4.99e-01 | 100.0% | 71.1% |
| 1vbkA03 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.65 | 50.0 | 5.04e-01 | 100.0% | 80.5% |
| 3g2mA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 48.0 | 4.48e-01 | 100.0% | 62.4% |
| 3loqA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.64 | 52.0 | 5.28e-01 | 100.0% | 88.4% |
| 1wy5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.63 | 59.0 | 4.92e-01 | 100.0% | 64.5% |
| 3x0dA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 47.0 | 4.50e-01 | 100.0% | 68.9% |
| 1u3dA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 52.0 | 4.89e-01 | 100.0% | 75.2% |
| 2qjoA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 53.0 | 4.62e-01 | 100.0% | 62.8% |
| 7bv3A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 52.0 | 4.15e-01 | 100.0% | 47.1% |
| 4u63A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 50.0 | 4.61e-01 | 100.0% | 68.4% |
| 2rbgA00 | 3.40.50.11100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 48.0 | 4.99e-01 | 100.0% | 92.7% |
| 4rsmA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 44.0 | 4.30e-01 | 96.2% | 69.3% |
| 2fqxA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 44.0 | 3.94e-01 | 77.3% | 68.6% |
| 5c5cA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 44.0 | 4.09e-01 | 95.5% | 62.8% |
| 2rjoA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 44.0 | 4.03e-01 | 96.2% | 60.1% |
| 2gpyB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 46.0 | 4.11e-01 | 84.8% | 70.8% |
| 1e7wB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 52.0 | 4.23e-01 | 100.0% | 58.5% |
| 4bwvA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 53.0 | 4.37e-01 | 100.0% | 59.5% |
| 2ynmC02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.57 | 46.0 | 4.56e-01 | 93.9% | 82.0% |
| 6c5cA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 49.0 | 4.44e-01 | 95.5% | 80.8% |
| 1uirA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 44.0 | 3.62e-01 | 100.0% | 44.3% |
| 1qydA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 50.0 | 4.47e-01 | 100.0% | 77.0% |
| 1u8xX01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 49.0 | 4.60e-01 | 100.0% | 98.2% |
| 1k70A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.55 | 48.0 | 3.75e-01 | 98.5% | 96.4% |
| 4u1qA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 47.0 | 4.25e-01 | 98.5% | 82.4% |
| 3i9fB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 45.0 | 4.16e-01 | 93.2% | 89.3% |
| 2p4dA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 38.0 | 3.58e-01 | 83.3% | 60.1% |
| 4rweA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 45.0 | 4.29e-01 | 96.2% | 78.6% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 45.0 | 4.23e-01 | 98.5% | 86.1% |
| 2hnhA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 45.0 | 3.62e-01 | 99.2% | 93.3% |
| 1b2rA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.51 | 45.0 | 4.22e-01 | 100.0% | 89.8% |
| 3jwhA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 44.0 | 3.99e-01 | 100.0% | 86.9% |
| 3c4aA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 41.0 | 3.49e-01 | 100.0% | 53.2% |
| 4pcaB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 44.0 | 3.80e-01 | 98.5% | 73.4% |
| 1iq8A01 | 3.20.20.105 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like | 0.50 | 43.0 | 3.24e-01 | 96.2% | 91.8% |
| 1mumA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.50 | 44.0 | 3.51e-01 | 100.0% | 68.9% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995746 | 2006.1.1.78 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › QueC | 0.90 | 80.0 | 6.48e-01 | 100.0% | 54.2% |
| 4991573 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.83 | 79.0 | 6.45e-01 | 100.0% | 69.8% |
| None | — | 0.83 | 79.0 | 6.53e-01 | 100.0% | 70.7% | |
| 5029061 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.69 | 54.0 | 5.51e-01 | 100.0% | 84.6% |
| 4611545 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.67 | 62.0 | 5.08e-01 | 100.0% | 60.4% |
| 4167294 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.67 | 61.0 | 4.92e-01 | 100.0% | 57.2% |
| 4486353 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.66 | 59.0 | 4.90e-01 | 100.0% | 56.8% |
| 4178958 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.66 | 61.0 | 5.05e-01 | 100.0% | 60.4% |
| 4051591 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.66 | 61.0 | 4.96e-01 | 100.0% | 57.9% |
| 4969692 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.64 | 51.0 | 4.73e-01 | 100.0% | 66.7% |
| 4296289 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.64 | 59.0 | 5.08e-01 | 100.0% | 64.9% |
| 4313435 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.64 | 59.0 | 4.83e-01 | 100.0% | 62.1% |
| 3419267 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.63 | 46.0 | 4.40e-01 | 74.2% | 96.7% |
| 4082908 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.63 | 58.0 | 5.01e-01 | 100.0% | 66.0% |
| 4976666 | 7509.1.1.0 ↗ | a/b three-layered sandwiches › NIF3 (NGG1p interacting factor 3)-like › NIF3 (NGG1p interacting factor 3)-like › NIF3 (NGG1p interacting factor 3)-like | 0.62 | 41.0 | 4.22e-01 | 100.0% | 67.7% |
| 3989136 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.62 | 57.0 | 4.81e-01 | 100.0% | 61.4% |
| 4202670 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.62 | 58.0 | 4.77e-01 | 100.0% | 59.1% |
| 4810431 | 2003.1.5.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 | 0.62 | 46.0 | 4.38e-01 | 100.0% | 66.0% |
| 4016247 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.57 | 44.0 | 3.95e-01 | 100.0% | 55.9% |
| 4940269 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.56 | 44.0 | 4.11e-01 | 85.6% | 91.2% |
| 3265025 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.55 | 48.0 | 4.36e-01 | 95.5% | 96.7% |
| 3731604 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.55 | 45.0 | 3.52e-01 | 100.0% | 39.7% |
| 5002602 | 2004.1.1.1204 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF1638 | 0.55 | 49.0 | 3.91e-01 | 100.0% | 49.1% |
| 5021402 | 2004.1.1.1204 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF1638 | 0.54 | 48.0 | 3.88e-01 | 100.0% | 49.6% |
| None | — | 0.54 | 47.0 | 3.86e-01 | 100.0% | 51.0% | |
| 4977362 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.54 | 47.0 | 4.28e-01 | 95.5% | 90.3% |
| 5046132 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.53 | 46.0 | 3.71e-01 | 93.9% | 94.1% |
| 4079208 | 7512.1.1.9 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › LpxB | 0.52 | 48.0 | 4.12e-01 | 100.0% | 83.4% |
| 4087124 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.52 | 45.0 | 3.89e-01 | 95.5% | 82.3% |
| 4969977 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.52 | 46.0 | 4.01e-01 | 100.0% | 82.9% |
| 5041206 | 2007.1.14.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like | 0.52 | 45.0 | 3.97e-01 | 95.5% | 76.4% |
| 3215420 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 43.0 | 3.70e-01 | 94.7% | 56.3% |
| 4000788 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.51 | 45.0 | 2.97e-01 | 96.2% | 69.4% |
| 4074225 | 2003.1.5.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD | 0.51 | 44.0 | 3.82e-01 | 96.2% | 83.8% |
D2
high
residues 165-241
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 58.0 | 5.20e-01 | 89.6% | 82.4% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.67 | 50.0 | 4.94e-01 | 80.5% | 84.3% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 51.0 | 5.21e-01 | 83.1% | 90.4% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.66 | 53.0 | 5.30e-01 | 87.0% | 96.2% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.64 | 51.0 | 4.99e-01 | 87.0% | 91.6% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.64 | 48.0 | 4.62e-01 | 80.5% | 87.4% |
| 4fxdA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.63 | 43.0 | 3.52e-01 | 72.7% | 78.4% |
| 5jjxA01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 53.0 | 3.56e-01 | 97.4% | 78.8% |
| 1lk3A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 44.0 | 3.70e-01 | 77.9% | 80.1% |
| 2g0dA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.60 | 53.0 | 3.35e-01 | 98.7% | 28.5% |
| 4mdcD02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 42.0 | 3.71e-01 | 75.3% | 67.5% |
| 3hgkE00 | 1.20.1280.110 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.60 | 41.0 | 4.14e-01 | 71.4% | 94.8% |
| 8alzB08 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.60 | 46.0 | 3.96e-01 | 85.7% | 74.0% |
| 7xcnM01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.60 | 49.0 | 4.97e-01 | 92.2% | 100.0% |
| 1ywqA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.60 | 40.0 | 3.00e-01 | 70.1% | 81.9% |
| 1yz5B00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.58 | 50.0 | 3.66e-01 | 100.0% | 48.5% |
| 1k3kA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.57 | 44.0 | 3.65e-01 | 84.4% | 55.5% |
| 2guzA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.55 | 45.0 | 4.74e-01 | 100.0% | 97.2% |
| 3t8qB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 43.0 | 3.84e-01 | 85.7% | 82.6% |
| 1e6bA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 43.0 | 3.81e-01 | 84.4% | 82.9% |
| 5jajA03 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.54 | 38.0 | 3.32e-01 | 75.3% | 48.3% |
| 3zheB02 | 1.20.190.60 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › | 0.54 | 47.0 | 3.65e-01 | 100.0% | 47.5% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.54 | 43.0 | 3.92e-01 | 88.3% | 72.4% |
| 2og9A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 41.0 | 3.53e-01 | 87.0% | 80.8% |
| 4bvxA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 39.0 | 3.61e-01 | 81.8% | 87.6% |
| 1k8kG00 | 1.25.40.190 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Actin-related protein 2/3 complex subunit 5 | 0.52 | 44.0 | 3.77e-01 | 100.0% | 55.4% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 35.0 | 3.01e-01 | 71.4% | 57.7% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4944186 | 4163.1.2.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like | 0.70 | 55.0 | 4.86e-01 | 84.4% | 60.6% |
| 3230341 | 5054.1.1.17 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TRAM_LAG1_CLN8 | 0.65 | 55.0 | 3.84e-01 | 92.2% | 74.0% |
| 3593891 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.63 | 47.0 | 4.64e-01 | 81.8% | 97.6% |
| 4098211 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.60 | 44.0 | 4.26e-01 | 79.2% | 95.6% |
| 3905613 | 4207.1.1.77 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Cys_rich_FGFR | 0.60 | 51.0 | 4.01e-01 | 94.8% | 73.3% |
| 3732240 | 109.4.1.1238 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zn_clus | 0.60 | 49.0 | 3.07e-01 | 96.1% | 28.2% |
| 3232748 | 109.4.1.1709 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF7758 | 0.60 | 54.0 | 3.93e-01 | 100.0% | 67.1% |
| 4100571 | 109.4.1.657 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4042 | 0.60 | 52.0 | 3.03e-01 | 98.7% | 14.7% |
| 4024119 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 51.0 | 3.69e-01 | 97.4% | 52.3% |
| 3395987 | 109.4.1.480 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TMEM214 | 0.60 | 52.0 | 3.73e-01 | 100.0% | 40.4% |
| 4969225 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.60 | 47.0 | 4.22e-01 | 85.7% | 69.1% |
| 3782661 | 109.4.1.15 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VHS | 0.60 | 53.0 | 4.17e-01 | 100.0% | 77.6% |
| 3348578 | 109.4.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › 14-3-3 | 0.60 | 51.0 | 3.64e-01 | 98.7% | 50.2% |
| 3794747 | 109.4.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › 14-3-3 | 0.60 | 48.0 | 3.29e-01 | 90.9% | 27.7% |
| 3683572 | 109.4.1.1531 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF7812 | 0.60 | 52.0 | 3.41e-01 | 100.0% | 58.9% |
| 3600701 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 51.0 | 3.64e-01 | 98.7% | 50.4% |
| 4300205 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.59 | 45.0 | 4.17e-01 | 83.1% | 87.0% |
| 3609331 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 46.0 | 3.13e-01 | 89.6% | 31.2% |
| 3908662 | 109.4.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › 14-3-3 | 0.58 | 50.0 | 3.59e-01 | 100.0% | 46.3% |
| 3926402 | 639.2.1.0 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) | 0.58 | 45.0 | 4.43e-01 | 81.8% | 78.8% |
| 3975479 | 109.1.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 | 0.57 | 43.0 | 3.64e-01 | 81.8% | 89.2% |
| 3239362 | 604.5.1.31 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TRAM_LAG1_CLN8 | 0.56 | 49.0 | 3.59e-01 | 100.0% | 72.9% |
| 3197493 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 44.0 | 3.73e-01 | 88.3% | 56.4% |
| 5035413 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.56 | 48.0 | 4.07e-01 | 96.1% | 100.0% |
| 3583780 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 49.0 | 4.18e-01 | 100.0% | 83.8% |
| 2428747 | 1030.1.1.1 ↗ | alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Csm2_III-A | 0.55 | 45.0 | 3.59e-01 | 90.9% | 77.2% |
| 3275370 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.55 | 47.0 | 3.11e-01 | 100.0% | 26.9% |
| 3458511 | 371.1.1.7 ↗ | few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › zf-RVT | 0.55 | 46.0 | 3.63e-01 | 93.5% | 89.7% |
| 2703886 | 3930.1.1.2 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RIG-I_C | 0.55 | 39.0 | 3.45e-01 | 74.0% | 50.9% |
| 3932432 | 604.5.1.31 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TRAM_LAG1_CLN8 | 0.55 | 47.0 | 3.38e-01 | 100.0% | 66.0% |
| None | — | 0.54 | 42.0 | 3.14e-01 | 84.4% | 54.1% | |
| 3681341 | 650.1.1.8 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › Ovate | 0.54 | 38.0 | 4.10e-01 | 77.9% | 89.2% |
| 3760189 | 604.5.1.31 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TRAM_LAG1_CLN8 | 0.54 | 47.0 | 3.46e-01 | 100.0% | 95.0% |
| 3296310 | 633.22.1.0 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) | 0.54 | 46.0 | 3.49e-01 | 97.4% | 77.0% |
| 3230343 | 109.54.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 | 0.54 | 46.0 | 3.99e-01 | 100.0% | 61.6% |
| 1676534 | 633.26.1.1 ↗ | alpha bundles › Bromodomain-like › SidC lipid-binding domain › SidC lipid-binding domain › SidC_lipid-bd | 0.53 | 47.0 | 3.96e-01 | 100.0% | 73.5% |