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OP172706.1__WAX08902.1__BS162P1_00123__00123

Bact-Vir

OP172706.1__WAX08902.1__BS162P1_00123__00123

Identity

Accession:
OP172706 ↗
Kingdom:
phage

Quality

87.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacteroides_phage_BS162P1

TaxID: 2968579

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-61
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 50.0 3.05e-01 95.0% 33.6%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.60 39.0 3.97e-01 96.7% 68.4%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 42.0 4.49e-01 96.7% 100.0%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 4.31e-01 100.0% 90.4%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 44.0 4.12e-01 100.0% 69.6%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 3.92e-01 100.0% 87.8%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 47.0 4.44e-01 100.0% 79.2%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 43.0 3.66e-01 90.0% 63.6%
4gp0B02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 45.0 3.75e-01 100.0% 97.6%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 45.0 4.27e-01 100.0% 77.3%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 44.0 4.13e-01 100.0% 70.4%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 37.0 3.31e-01 73.3% 52.1%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 40.0 4.16e-01 93.3% 87.3%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 44.0 4.29e-01 100.0% 81.4%
4xcmA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.54 40.0 3.29e-01 100.0% 40.7%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 44.0 4.36e-01 100.0% 90.3%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.54 39.0 2.85e-01 81.7% 81.9%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 43.0 4.41e-01 100.0% 96.6%
2gumB03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.54 46.0 3.76e-01 100.0% 88.4%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 39.0 3.99e-01 100.0% 86.0%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 44.0 4.32e-01 100.0% 88.1%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 45.0 4.22e-01 100.0% 82.1%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.53 43.0 3.54e-01 93.3% 51.7%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 45.0 3.94e-01 100.0% 80.2%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 41.0 4.07e-01 100.0% 84.1%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 41.0 4.21e-01 100.0% 94.9%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.52 43.0 3.75e-01 100.0% 90.4%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 42.0 4.24e-01 100.0% 94.9%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 41.0 4.18e-01 100.0% 95.0%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 43.0 4.28e-01 93.3% 95.3%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.52 42.0 3.57e-01 93.3% 90.0%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.52 35.0 3.63e-01 100.0% 77.2%
3s8zA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 39.0 2.48e-01 81.7% 21.2%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 44.0 4.13e-01 100.0% 80.0%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 42.0 4.33e-01 100.0% 98.3%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.52 37.0 3.87e-01 100.0% 92.3%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.52 39.0 4.12e-01 100.0% 100.0%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 41.0 4.22e-01 98.3% 100.0%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.84e-01 100.0% 92.0%
7cr6D01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.51 42.0 3.85e-01 95.0% 90.2%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 4.14e-01 95.0% 87.1%
4a2aA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.50 41.0 4.04e-01 93.3% 92.3%
1npeA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 40.0 2.63e-01 88.3% 24.3%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 36.0 3.75e-01 98.3% 85.7%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.50 40.0 3.18e-01 91.7% 76.8%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 41.0 4.08e-01 93.3% 95.3%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4424609 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.65 43.0 4.51e-01 88.3% 77.4%
4972400 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 45.0 4.86e-01 91.7% 100.0%
3948516 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.64 42.0 4.18e-01 88.3% 63.1%
3624119 2.3.1.2 ↗ beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.62 48.0 3.56e-01 81.7% 53.1%
5054531 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 44.0 3.77e-01 83.3% 47.0%
5040416 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 43.0 4.62e-01 96.7% 92.0%
4988502 375.1.1.298 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_HMPTM 0.59 37.0 4.07e-01 75.0% 86.7%
3400449 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 44.0 3.27e-01 85.0% 70.3%
4478971 4.1.1.174 ↗ beta barrels › SH3 › SH3 › SH3 › DUF951 0.58 45.0 4.46e-01 100.0% 83.1%
4994957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 45.0 4.65e-01 100.0% 94.5%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 42.0 4.39e-01 100.0% 87.3%
2028019 4.1.1.136 ↗ beta barrels › SH3 › SH3 › SH3 › NMD_SH3 0.57 47.0 4.60e-01 100.0% 87.9%
3747392 4.1.1.31 ↗ beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.56 43.0 4.22e-01 93.3% 78.5%
3486271 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 38.0 3.45e-01 73.3% 52.2%
3230520 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 38.0 3.39e-01 71.7% 51.1%
4957409 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 39.0 4.12e-01 100.0% 90.0%
3935130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 38.0 3.98e-01 75.0% 89.1%
3469800 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 44.0 4.11e-01 100.0% 68.8%
3449268 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 38.0 3.46e-01 73.3% 55.3%
3416133 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 45.0 4.24e-01 100.0% 76.0%
3625911 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 44.0 4.35e-01 100.0% 86.2%
3222195 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 44.0 4.37e-01 100.0% 86.2%
4404324 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 43.0 3.94e-01 91.7% 71.8%
3769507 4.1.1.31 ↗ beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.55 40.0 3.87e-01 100.0% 70.0%
3765126 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 42.0 4.37e-01 98.3% 98.2%
4998620 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.54 47.0 3.07e-01 100.0% 44.6%
3547089 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 40.0 3.59e-01 100.0% 54.4%
3620934 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.54 44.0 4.05e-01 100.0% 70.0%
4171510 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 43.0 4.05e-01 100.0% 70.0%
3484478 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.54 39.0 3.92e-01 100.0% 81.7%
4155197 243.3.1.52 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › UPF0182 0.54 38.0 2.76e-01 75.0% 52.6%
3619598 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.53 42.0 3.83e-01 96.7% 63.5%
3486189 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 44.0 4.43e-01 98.3% 95.0%
3902975 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.53 43.0 4.31e-01 95.0% 93.3%
4956443 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 39.0 3.94e-01 100.0% 85.0%
3964608 220.1.1.104 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Cpta_toxin 0.52 39.0 3.85e-01 88.3% 87.1%
3925642 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.52 43.0 3.78e-01 100.0% 59.0%
4579534 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.52 42.0 4.18e-01 91.7% 96.9%
4043601 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.52 41.0 4.08e-01 88.3% 90.8%
3928262 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 42.0 4.22e-01 100.0% 93.3%
3260661 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 35.0 3.17e-01 71.7% 88.9%
4032291 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.52 42.0 4.17e-01 91.7% 98.5%
3356591 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 35.0 3.10e-01 71.7% 47.4%
3494671 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 33.0 3.62e-01 90.0% 88.9%
3913637 4.1.1.31 ↗ beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.51 43.0 3.84e-01 100.0% 68.9%
4059146 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.51 41.0 4.07e-01 91.7% 96.9%
3845351 4.1.1.31 ↗ beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.51 42.0 3.79e-01 100.0% 66.7%
4582456 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.51 41.0 3.96e-01 91.7% 92.9%
3991186 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.51 39.0 3.29e-01 90.0% 56.5%
3805766 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.50 39.0 4.04e-01 93.3% 98.2%
3213828 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.50 41.0 3.54e-01 100.0% 54.5%
3480822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 37.0 3.88e-01 98.3% 100.0%
3828348 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 37.0 3.67e-01 100.0% 76.9%
4425795 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.50 41.0 4.03e-01 91.7% 98.5%
3487990 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 40.0 3.26e-01 88.3% 96.5%
D2 medium residues 64-97
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a55A01 3.10.20.770 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.68 49.0 2.92e-01 88.2% 9.7%
1irzA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 50.0 4.31e-01 94.1% 56.2%
1zmbA02 6.10.170.10 Special › Helix non-globular › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › 0.65 46.0 4.64e-01 82.4% 77.8%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.63 43.0 3.24e-01 73.5% 27.9%
3fixA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 42.0 2.90e-01 88.2% 18.2%
3lysA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.57 39.0 3.00e-01 82.4% 27.6%
1gz1A00 3.20.20.40 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase 0.55 41.0 2.42e-01 94.1% 10.5%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.50 38.0 3.20e-01 82.4% 49.2%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3698416 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.71 54.0 3.25e-01 88.2% 12.9%
3284602 2003.1.1.61 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR 0.66 48.0 2.84e-01 82.4% 8.7%
3533303 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.65 47.0 4.75e-01 82.4% 82.9%
4495082 7523.1.1.8 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 0.64 47.0 2.87e-01 88.2% 13.2%
3916184 221.1.1.168 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B 0.61 41.0 2.50e-01 85.3% 9.4%
3943173 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.58 43.0 4.04e-01 94.1% 66.0%
138576 186.1.1.5 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 0.57 39.0 3.02e-01 82.4% 28.4%
4669981 230.3.1.0 ↗ a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain 0.50 41.0 2.75e-01 100.0% 24.8%