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OP172717.1__WAX09404.1__BT566P1_00021__00021

Bact-Vir

OP172717.1__WAX09404.1__BT566P1_00021__00021

Identity

Accession:
OP172717 ↗
Kingdom:
phage

Quality

89.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-61
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cuwA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.70 63.0 5.67e-01 100.0% 97.6%
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.70 52.0 5.27e-01 100.0% 81.7%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.70 59.0 5.47e-01 100.0% 73.7%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.69 57.0 5.32e-01 100.0% 73.7%
1t4aA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.65 57.0 5.26e-01 100.0% 97.5%
3d0jA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 40.0 3.11e-01 100.0% 29.7%
2jwyA01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.59 50.0 3.97e-01 100.0% 48.1%
2zaiA04 2.60.40.3030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 50.0 3.98e-01 100.0% 61.4%
1lr5B00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 43.0 3.23e-01 100.0% 30.2%
5e55B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 40.0 3.52e-01 100.0% 47.3%
3gbwA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.58 48.0 3.67e-01 100.0% 41.6%
3e1uA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.57 48.0 3.51e-01 100.0% 38.0%
1xf1A03 2.60.40.1710 Mainly Beta › Sandwich › Immunoglobulin-like › Subtilisin-like superfamily 0.57 48.0 3.84e-01 100.0% 58.0%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.57 44.0 3.70e-01 98.3% 48.2%
1h2cA00 2.70.20.20 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain 0.55 47.0 3.80e-01 100.0% 95.2%
4mt1A07 3.30.70.1440 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.55 47.0 4.04e-01 100.0% 90.2%
1cd9B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 37.0 3.26e-01 100.0% 43.9%
1x9tA02 3.90.1620.10 Alpha Beta › Alpha-Beta Complex › adenovirus 2 penton base, domain 2 › adenovirus 2 penton base, domain 2 0.55 46.0 3.04e-01 100.0% 79.3%
1wapA00 2.60.40.50 Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like 0.54 38.0 3.71e-01 100.0% 67.6%
5a3lA00 2.60.120.1560 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.22e-01 100.0% 36.4%
5cw3C01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.54 46.0 3.51e-01 98.3% 43.5%
4g1lA01 2.70.20.50 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, N-terminal domain 0.54 45.0 3.41e-01 100.0% 69.3%
1cauA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 37.0 2.69e-01 100.0% 23.8%
3ttgA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.54 46.0 2.91e-01 100.0% 27.0%
3n40P04 2.60.40.2400 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C 0.53 34.0 3.28e-01 100.0% 53.4%
4d10F01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.53 44.0 3.26e-01 96.7% 35.2%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.53 44.0 3.76e-01 100.0% 57.8%
4gucA00 2.60.40.3720 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 46.0 3.70e-01 96.7% 52.2%
2hgsA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 44.0 3.65e-01 95.0% 57.7%
2mcfA00 3.40.50.11630 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 43.0 3.43e-01 100.0% 60.1%
1m0wA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.52 43.0 3.65e-01 96.7% 52.8%
3f1jA00 2.70.20.40 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Borna disease virus, matrix protein 0.52 44.0 3.37e-01 95.0% 83.6%
2bs2B01 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.52 43.0 3.72e-01 100.0% 83.0%
1ezsA00 2.60.40.550 Mainly Beta › Sandwich › Immunoglobulin-like › Ecotin 0.52 43.0 3.55e-01 100.0% 76.8%
2z13A00 2.30.29.170 Mainly Beta › Roll › PH-domain like › 0.52 44.0 3.66e-01 100.0% 74.4%
3bv8A00 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.52 43.0 3.88e-01 100.0% 65.9%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 37.0 3.28e-01 100.0% 48.0%
2yz2B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 38.0 2.59e-01 81.7% 63.1%
1wktA00 2.60.20.20 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › 0.52 34.0 3.14e-01 100.0% 47.7%
1n26A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.38e-01 98.3% 59.0%
1xvsA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.51 42.0 3.46e-01 100.0% 48.8%
3x1lB02 3.30.1040.70 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.51 36.0 3.63e-01 80.0% 90.5%
1bteA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.51 38.0 3.42e-01 100.0% 55.4%
4c97A02 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 45.0 3.46e-01 100.0% 92.5%
2y8yA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.50 41.0 3.49e-01 98.3% 98.3%
4emeC02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.50 41.0 3.35e-01 100.0% 69.6%
1e3hA03 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.50 41.0 2.99e-01 100.0% 37.6%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4939739 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.72 61.0 6.16e-01 100.0% 94.9%
4943401 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.70 61.0 5.43e-01 100.0% 68.2%
4084879 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.67 60.0 5.36e-01 100.0% 70.6%
3611709 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 58.0 4.39e-01 100.0% 47.3%
4128974 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.67 59.0 5.40e-01 100.0% 75.0%
3923903 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 44.0 3.69e-01 100.0% 40.0%
3332357 221.1.1.51 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_C2 0.63 53.0 4.12e-01 93.3% 71.6%
3972565 11.1.1.993 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30426 0.63 53.0 4.38e-01 100.0% 51.7%
3247277 5069.1.3.99 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › NRF 0.63 53.0 3.97e-01 100.0% 36.3%
3705968 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.62 54.0 4.15e-01 100.0% 49.0%
4648475 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.62 51.0 5.16e-01 100.0% 95.0%
5043348 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 52.0 3.86e-01 100.0% 42.4%
3892842 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.61 50.0 4.88e-01 100.0% 84.6%
3235737 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 44.0 3.74e-01 100.0% 44.5%
4990821 7571.1.1.1 a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N 0.60 45.0 2.99e-01 83.3% 20.7%
3595385 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.60 51.0 3.86e-01 100.0% 50.0%
3489664 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.60 50.0 4.11e-01 100.0% 56.7%
3487745 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 50.0 3.57e-01 100.0% 45.0%
3698084 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.58 51.0 3.14e-01 100.0% 22.8%
3573640 11.2.1.16 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PKC_C2 0.58 52.0 4.09e-01 100.0% 51.2%
4032883 1.1.13.3 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.58 45.0 3.88e-01 90.0% 71.4%
3252771 821.1.1.0 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.58 47.0 4.28e-01 100.0% 67.1%
3992476 1116.1.1.2 a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD 0.57 49.0 3.79e-01 100.0% 50.3%
3573833 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 49.0 4.10e-01 100.0% 60.0%
3211800 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 48.0 4.19e-01 100.0% 62.2%
1298682 10.32.1.168 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › HA70_C 0.57 44.0 3.49e-01 98.3% 39.6%
4032409 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.46e-01 95.0% 85.3%
4144303 11.1.1.3 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.56 48.0 3.60e-01 100.0% 39.3%
4636193 11.1.1.464 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › AMOP 0.56 47.0 3.49e-01 100.0% 39.1%
5077592 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 41.0 3.33e-01 81.7% 72.8%
3245639 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.56 47.0 3.70e-01 100.0% 47.1%
4207776 2492.1.1.2 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.56 47.0 3.55e-01 95.0% 38.7%
3925634 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.56 48.0 4.59e-01 98.3% 94.3%
4519565 4139.1.1.0 a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like 0.55 46.0 3.75e-01 98.3% 58.4%
3799804 2492.1.1.8 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172 0.55 46.0 3.27e-01 98.3% 34.7%
3384165 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.55 46.0 3.75e-01 100.0% 76.8%
3995060 11.1.4.67 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PKC_C2 0.55 47.0 4.11e-01 100.0% 74.7%
3923115 4004.1.1.5 beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › DAGK_acc 0.54 46.0 3.33e-01 100.0% 96.9%
5028941 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 47.0 3.34e-01 100.0% 35.6%
3774570 11.1.1.934 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N, Arrestin_C 0.54 39.0 2.87e-01 80.0% 43.2%
3874464 304.48.1.1 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.54 43.0 2.78e-01 100.0% 16.3%
3507557 4081.1.1.11 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › CreD 0.54 47.0 3.16e-01 100.0% 36.6%
3929299 1116.1.1.2 a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD 0.54 45.0 3.14e-01 100.0% 31.3%
3227513 3115.1.1.3 a+b two layers › GP2-like › RplX-like › RplX-like › NRF 0.54 46.0 3.90e-01 100.0% 58.1%
3582543 11.1.1.13 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Motile_Sperm 0.54 45.0 3.54e-01 100.0% 52.9%
3619356 1116.1.1.2 a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD 0.53 43.0 3.14e-01 100.0% 35.2%
3273223 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.53 45.0 3.55e-01 100.0% 64.5%
3178419 11.1.1.378 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Rgp1 0.53 40.0 3.07e-01 86.7% 57.4%
5005662 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 39.0 3.05e-01 85.0% 57.4%
3932049 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.53 47.0 3.36e-01 100.0% 43.4%
5082586 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 3.65e-01 100.0% 51.7%
5000967 304.5.1.3 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 0.53 43.0 3.75e-01 100.0% 82.9%
3520635 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 3.25e-01 100.0% 38.9%
3443343 11.10.1.5 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.53 44.0 3.45e-01 100.0% 49.7%
3720186 859.1.1.0 a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 0.53 46.0 3.32e-01 98.3% 84.4%
5047757 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 44.0 3.73e-01 100.0% 93.6%
3256250 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 43.0 3.40e-01 100.0% 54.5%
3897906 1116.1.1.2 a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD 0.52 44.0 3.17e-01 100.0% 31.8%
3581667 11.1.4.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 0.52 46.0 3.66e-01 100.0% 49.6%
4088630 206.1.3.19 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C 0.52 38.0 2.69e-01 81.7% 45.6%
2770666 834.1.1.1 a+b two layers › Photosystem I subunit PsaD › Photosystem I subunit PsaD › Photosystem I subunit PsaD › PsaD 0.52 45.0 3.44e-01 100.0% 42.0%
3517524 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 44.0 3.87e-01 100.0% 72.6%
3291916 2492.1.1.4 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.51 40.0 2.69e-01 96.7% 29.8%
3927107 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.51 45.0 3.54e-01 100.0% 66.4%
4961996 11.1.1.1403 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1616 0.51 41.0 3.39e-01 98.3% 52.8%
3411517 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.50 37.0 2.80e-01 85.0% 71.7%
4385290 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.50 41.0 3.25e-01 100.0% 64.0%