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OP172736.1__WAX10275.1__BV57P1_00015__00015
Bact-VirOP172736.1__WAX10275.1__BV57P1_00015__00015
Identity
- Accession:
- OP172736 ↗
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 52-101
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lxuX06 | 1.25.40.710 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.82 | 57.0 | 3.50e-01 | 72.0% | 17.3% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 51.0 | 4.86e-01 | 92.0% | 62.1% |
| 1lziA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.71 | 52.0 | 3.28e-01 | 80.0% | 41.7% |
| 1wtyA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.68 | 58.0 | 4.48e-01 | 98.0% | 47.4% |
| 1is8A01 | 1.10.286.10 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain | 0.68 | 48.0 | 4.60e-01 | 76.0% | 68.3% |
| 2vy1A00 | 1.10.4180.10 | Mainly Alpha › Orthogonal Bundle › Protein LEAFY › Protein LEAFY | 0.68 | 53.0 | 3.71e-01 | 86.0% | 30.7% |
| 2ja2A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.66 | 47.0 | 4.71e-01 | 76.0% | 90.4% |
| 2kvdA02 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.65 | 45.0 | 4.35e-01 | 80.0% | 65.5% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 46.0 | 4.34e-01 | 94.0% | 62.9% |
| 7x4nE01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.62 | 56.0 | 3.34e-01 | 98.0% | 24.4% |
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.58 | 41.0 | 3.65e-01 | 86.0% | 48.2% |
| 2o5rA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.57 | 41.0 | 4.15e-01 | 80.0% | 100.0% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.56 | 40.0 | 4.12e-01 | 80.0% | 100.0% |
| 1v1gA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 42.0 | 2.83e-01 | 82.0% | 31.4% |
| 3hdvB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 41.0 | 3.15e-01 | 84.0% | 83.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969892 | 5060.1.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39 | 0.86 | 50.0 | 4.00e-01 | 98.0% | 33.3% |
| 3938667 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.80 | 56.0 | 4.54e-01 | 88.0% | 41.1% |
| 4994576 | 101.35.1.36 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › PF27234 | 0.75 | 56.0 | 5.01e-01 | 96.0% | 56.5% |
| 3614319 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 58.0 | 5.16e-01 | 86.0% | 90.0% |
| 3443280 | 130.1.1.42 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › DUF7787 | 0.70 | 49.0 | 4.78e-01 | 80.0% | 67.3% |
| 3367509 | 101.34.1.1 ↗ | alpha arrays › HTH › Transcription factor LEAFY › Transcription factor LEAFY › C_LFY_FLO | 0.70 | 54.0 | 3.78e-01 | 86.0% | 26.1% |
| 1140569 | 101.34.1.1 ↗ | alpha arrays › HTH › Transcription factor LEAFY › Transcription factor LEAFY › C_LFY_FLO | 0.69 | 54.0 | 3.80e-01 | 86.0% | 31.6% |
| 3994858 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.68 | 47.0 | 4.03e-01 | 88.0% | 45.0% |
| None | — | 0.65 | 50.0 | 3.26e-01 | 86.0% | 36.6% | |
| 3223895 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.63 | 47.0 | 3.49e-01 | 82.0% | 46.7% |
| 4969457 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.59 | 45.0 | 3.18e-01 | 86.0% | 33.5% |
| 3420324 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.56 | 42.0 | 3.56e-01 | 86.0% | 55.3% |