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OP172738.1__WAX10401.1__BV57P3_00046__00046
Bact-VirOP172738.1__WAX10401.1__BV57P3_00046__00046
Identity
- Accession:
- OP172738 ↗
- Kingdom:
- phage
Quality
57.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-48
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.79 | 54.0 | 3.80e-01 | 72.2% | 28.4% |
| 7ct3A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.75 | 61.0 | 4.40e-01 | 100.0% | 37.6% |
| 6ro0B01 | 3.10.40.10 | Alpha Beta › Roll › Pertussis Toxin; Chain B, domain 1 › Aerolysin/Pertussis toxin (APT), N-terminal domain | 0.74 | 57.0 | 4.41e-01 | 100.0% | 37.2% |
| 4trtA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.74 | 53.0 | 3.70e-01 | 75.0% | 26.9% |
| 8b55A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 51.0 | 3.26e-01 | 88.9% | 15.1% |
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.72 | 49.0 | 3.24e-01 | 72.2% | 47.4% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.70 | 59.0 | 4.05e-01 | 100.0% | 56.4% |
| 3lidA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.69 | 55.0 | 4.24e-01 | 100.0% | 49.0% |
| 2dk6A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.68 | 53.0 | 4.14e-01 | 100.0% | 54.3% |
| 6mjjC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 53.0 | 3.79e-01 | 94.4% | 40.4% |
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.66 | 47.0 | 3.58e-01 | 80.6% | 49.0% |
| 3nvoA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.65 | 54.0 | 3.71e-01 | 100.0% | 27.5% |
| 3fvcA01 | 2.30.30.1230 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 51.0 | 4.11e-01 | 97.2% | 73.8% |
| 4tpsA00 | 3.30.310.250 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA | 0.64 | 50.0 | 3.37e-01 | 88.9% | 35.7% |
| 7sz2A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.63 | 50.0 | 3.94e-01 | 100.0% | 67.4% |
| 5wceA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.63 | 48.0 | 3.29e-01 | 83.3% | 88.4% |
| 2ix2A01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.63 | 48.0 | 2.98e-01 | 88.9% | 95.0% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.63 | 53.0 | 3.93e-01 | 100.0% | 49.0% |
| 1zoqA00 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.62 | 43.0 | 2.80e-01 | 77.8% | 44.5% |
| 4iusA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 51.0 | 3.10e-01 | 100.0% | 17.1% |
| 7q5yB01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.62 | 42.0 | 2.97e-01 | 72.2% | 68.3% |
| 3rkgA01 | 2.40.128.330 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 49.0 | 3.78e-01 | 100.0% | 46.8% |
| 3kt7A01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.60 | 43.0 | 2.69e-01 | 80.6% | 54.9% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 47.0 | 3.20e-01 | 86.1% | 35.0% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 48.0 | 2.84e-01 | 100.0% | 91.9% |
| 4amcA01 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.60 | 49.0 | 4.66e-01 | 100.0% | 80.4% |
| 4bubA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.59 | 41.0 | 2.56e-01 | 75.0% | 13.5% |
| 2yq2A01 | 2.60.320.20 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › Pestivirus envelope glycoprotein E2, domain A | 0.59 | 47.0 | 3.71e-01 | 100.0% | 63.6% |
| 4pbcA02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.58 | 45.0 | 3.26e-01 | 100.0% | 35.6% |
| 1q67A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 48.0 | 3.29e-01 | 100.0% | 66.4% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 45.0 | 2.78e-01 | 100.0% | 33.9% |
| 2gzaA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.57 | 42.0 | 3.32e-01 | 100.0% | 89.8% |
| 7lgjA01 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.57 | 44.0 | 2.75e-01 | 94.4% | 15.6% |
| 1bymA00 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.56 | 42.0 | 3.14e-01 | 83.3% | 56.7% |
| 2pd0A01 | 3.30.2310.50 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › Protein of unknown function (DUF3228), domain 1 | 0.56 | 45.0 | 3.25e-01 | 100.0% | 69.2% |
| 2joiA00 | 3.30.310.190 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.53 | 44.0 | 3.30e-01 | 100.0% | 55.2% |
| 1yqeA01 | 3.40.630.50 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like | 0.52 | 43.0 | 2.79e-01 | 100.0% | 26.9% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 36.0 | 2.98e-01 | 83.3% | 40.7% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.51 | 40.0 | 2.58e-01 | 100.0% | 62.0% |
| 2lydA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 41.0 | 2.84e-01 | 100.0% | 51.5% |
| 4opmA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 2.47e-01 | 97.2% | 52.5% |
| 4j4hA01 | 3.40.50.12150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 38.0 | 2.76e-01 | 91.7% | 25.9% |
| 4nhxA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.50 | 41.0 | 2.51e-01 | 91.7% | 20.7% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.50 | 37.0 | 2.58e-01 | 100.0% | 23.8% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965099 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.84 | 58.0 | 4.04e-01 | 72.2% | 29.5% |
| 4971771 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.78 | 65.0 | 4.26e-01 | 100.0% | 24.4% |
| 5071935 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.76 | 61.0 | 4.32e-01 | 100.0% | 33.8% |
| 5006876 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.74 | 60.0 | 4.37e-01 | 100.0% | 41.6% |
| 4954769 | 2498.2.1.0 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain | 0.74 | 50.0 | 3.29e-01 | 72.2% | 17.4% |
| 4805448 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.74 | 53.0 | 3.41e-01 | 77.8% | 18.6% |
| 4069542 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.73 | 53.0 | 3.37e-01 | 77.8% | 17.1% |
| 4587906 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.73 | 62.0 | 4.60e-01 | 100.0% | 54.0% |
| 3607176 | 101.17.1.4 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › HU-CCDC81_euk_2 | 0.72 | 58.0 | 4.56e-01 | 94.4% | 43.9% |
| 5064558 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.72 | 56.0 | 3.30e-01 | 100.0% | 9.7% |
| 3963900 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.72 | 61.0 | 4.69e-01 | 100.0% | 60.0% |
| 4286824 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.72 | 60.0 | 4.57e-01 | 100.0% | 73.3% |
| 4247937 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.71 | 58.0 | 4.19e-01 | 97.2% | 35.5% |
| 4328415 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.71 | 59.0 | 4.61e-01 | 100.0% | 65.9% |
| 4472787 | 3018.1.1.3 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › PF28558 | 0.71 | 58.0 | 4.64e-01 | 100.0% | 60.0% |
| 4303875 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.71 | 59.0 | 4.51e-01 | 100.0% | 61.1% |
| 4928701 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.69 | 52.0 | 4.02e-01 | 100.0% | 48.6% |
| 5059089 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 58.0 | 3.39e-01 | 100.0% | 95.7% |
| 3173084 | 331.1.1.13 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C | 0.68 | 56.0 | 4.22e-01 | 91.7% | 52.9% |
| 4195481 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.68 | 56.0 | 4.33e-01 | 100.0% | 60.0% |
| 4093822 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.68 | 58.0 | 4.42e-01 | 100.0% | 63.3% |
| 3687323 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.68 | 55.0 | 4.72e-01 | 100.0% | 66.2% |
| 4024657 | 109.4.1.235 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 | 0.68 | 59.0 | 3.23e-01 | 100.0% | 6.2% |
| 4048831 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.67 | 54.0 | 4.28e-01 | 100.0% | 64.4% |
| 4301925 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.67 | 54.0 | 4.34e-01 | 100.0% | 68.2% |
| 4162390 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.67 | 53.0 | 3.24e-01 | 100.0% | 25.0% |
| 5045511 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.67 | 50.0 | 3.03e-01 | 83.3% | 12.5% |
| 3236067 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.67 | 55.0 | 3.41e-01 | 100.0% | 30.3% |
| 3222419 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.66 | 52.0 | 4.13e-01 | 88.9% | 66.7% |
| 3721249 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.66 | 48.0 | 4.43e-01 | 100.0% | 56.4% |
| 5035419 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.66 | 55.0 | 3.23e-01 | 97.2% | 96.3% |
| 3582472 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.66 | 49.0 | 4.43e-01 | 100.0% | 57.6% |
| 3972332 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.65 | 45.0 | 3.32e-01 | 86.1% | 24.3% |
| 4374595 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.64 | 44.0 | 3.74e-01 | 86.1% | 40.0% |
| 3643064 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.64 | 48.0 | 3.18e-01 | 100.0% | 20.0% |
| 3667170 | 316.1.1.25 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Nrap_D4 | 0.62 | 48.0 | 3.10e-01 | 88.9% | 43.7% |
| 3627280 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.60 | 51.0 | 4.09e-01 | 100.0% | 72.0% |
| 3706340 | 319.1.1.12 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS_DNAAF11_C | 0.59 | 50.0 | 3.42e-01 | 100.0% | 55.4% |
| 4026513 | 319.1.1.12 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS_DNAAF11_C | 0.58 | 49.0 | 3.19e-01 | 100.0% | 39.4% |
| 3268750 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.58 | 51.0 | 3.22e-01 | 100.0% | 34.3% |
| 3599989 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.58 | 51.0 | 3.57e-01 | 100.0% | 61.8% |
| 3499156 | 319.1.1.12 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS_DNAAF11_C | 0.57 | 50.0 | 3.35e-01 | 100.0% | 51.9% |
| 3479119 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.57 | 50.0 | 3.34e-01 | 100.0% | 51.9% |
| 1921567 | 223.1.1.21 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like | 0.56 | 43.0 | 2.64e-01 | 100.0% | 31.4% |
| 3386843 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.55 | 49.0 | 4.10e-01 | 100.0% | 68.3% |
| 4058368 | 2003.1.5.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TPMT | 0.55 | 46.0 | 2.91e-01 | 100.0% | 36.3% |
| 3332079 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.54 | 48.0 | 2.71e-01 | 100.0% | 31.6% |
| 3646130 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.52 | 45.0 | 2.72e-01 | 100.0% | 37.3% |
| 3280341 | 211.1.1.24 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Ble-like_N | 0.52 | 44.0 | 4.01e-01 | 100.0% | 92.0% |
| 141372 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.51 | 36.0 | 2.97e-01 | 86.1% | 40.7% |