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OP172752.1__WBK39602.1__CB452P1_000018__00018
Bact-VirOP172752.1__WBK39602.1__CB452P1_000018__00018
Identity
- Accession:
- OP172752 ↗
- Kingdom:
- phage
Quality
60.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 93-181
Domain cluster:
rep: IMGVR_UViG_2684622506_000001-2684622506-2684651360__D76-146
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 37.0 | 4.70e-01 | 78.7% | 74.5% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 36.0 | 4.48e-01 | 82.0% | 70.7% |
| 2i5uA00 | 1.10.10.630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like | 0.68 | 51.0 | 5.40e-01 | 79.8% | 100.0% |
| 3kp1E02 | 1.10.8.1000 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ornithine 4,5 aminomutase S component, alpha subunit-like | 0.67 | 49.0 | 5.44e-01 | 77.5% | 100.0% |
| 4ae4A00 | 1.20.120.1920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UBAP1 SOUBA domain | 0.66 | 54.0 | 5.05e-01 | 95.5% | 71.1% |
| 2kebA00 | 1.10.8.530 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA polymerase alpha-primase, subunit B, N-terminal domain | 0.64 | 51.0 | 5.41e-01 | 87.6% | 100.0% |
| 3godB02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.64 | 44.0 | 3.39e-01 | 71.9% | 51.4% |
| 3m66A00 | 1.25.70.10 | Mainly Alpha › Alpha Horseshoe › Transcription termination factor 3, mitochondrial › Transcription termination factor 3, mitochondrial | 0.63 | 54.0 | 3.91e-01 | 98.9% | 47.4% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 48.0 | 4.50e-01 | 87.6% | 96.5% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 44.0 | 4.29e-01 | 76.4% | 93.8% |
| 5y9sC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 4.21e-01 | 98.9% | 78.0% |
| 2pjqA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.58 | 48.0 | 4.87e-01 | 91.0% | 97.8% |
| 7osfB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 42.0 | 3.22e-01 | 78.7% | 49.1% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 41.0 | 4.26e-01 | 84.3% | 87.7% |
| 4qicC01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.54 | 48.0 | 4.28e-01 | 96.6% | 84.8% |
| 6xpdA01 | 1.20.1510.10 | Mainly Alpha › Up-down Bundle › Alpha-lytic protease prodomain-like › Cation efflux protein transmembrane domain | 0.51 | 38.0 | 2.98e-01 | 79.8% | 89.1% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.50 | 44.0 | 3.78e-01 | 95.5% | 94.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032310 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.89 | 83.0 | 6.81e-01 | 100.0% | 62.0% |
| 3164789 | 159.1.2.5 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › TMP_3 | 0.83 | 76.0 | 6.09e-01 | 100.0% | 81.8% |
| 3941716 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.82 | 73.0 | 6.45e-01 | 98.9% | 74.6% |
| 4031085 | 3826.1.1.79 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF1024 | 0.75 | 38.0 | 4.05e-01 | 84.3% | 56.4% |
| 3559464 | 103.1.1.23 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBAP-1_UBA2 | 0.74 | 50.0 | 5.62e-01 | 76.4% | 93.8% |
| 5025739 | 4953.1.1.2 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ADSL_C | 0.71 | 43.0 | 4.65e-01 | 84.3% | 72.0% |
| 382196 | 3269.1.1.2 ↗ | alpha arrays › D-ornithine aminomutase S component-related › D-ornithine aminomutase S component-related › D-ornithine aminomutase S component-related › OAM_alpha | 0.69 | 49.0 | 4.57e-01 | 74.2% | 63.6% |
| 4604029 | 6058.1.1.1 ↗ | alpha arrays › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › DAO_C | 0.68 | 54.0 | 4.71e-01 | 87.6% | 57.0% |
| 4986459 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.67 | 59.0 | 4.97e-01 | 100.0% | 61.3% |
| 3946003 | 5065.1.1.1 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 | 0.63 | 53.0 | 3.76e-01 | 92.1% | 86.1% |
| 5000649 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.63 | 54.0 | 5.03e-01 | 98.9% | 74.8% |
| 3831728 | 3238.1.1.1 ↗ | alpha superhelices › Mitochondrial mTERF-like › Mitochondrial mTERF › Mitochondrial mTERF › mTERF | 0.62 | 52.0 | 3.42e-01 | 96.6% | 20.7% |
| None | — | 0.54 | 44.0 | 2.91e-01 | 91.0% | 94.7% | |
| 3343753 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.53 | 42.0 | 4.19e-01 | 88.8% | 93.7% |