←Back to structures

OP172752.1__WBK39654.1__CB452P1_000070__00070

Bact-Vir

OP172752.1__WBK39654.1__CB452P1_000070__00070

Identity

Accession:
OP172752 ↗
Kingdom:
phage

Quality

82.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_CB452P1

TaxID: 2968621

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-58
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mvfD00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.86 63.0 6.78e-01 77.4% 95.5%
1ub4C00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.80 67.0 5.98e-01 92.5% 66.7%
1yfbA00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.77 57.0 5.79e-01 83.0% 80.8%
3o27B00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.72 55.0 5.46e-01 83.0% 80.7%
2l66A00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.69 51.0 5.18e-01 83.0% 81.1%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.66 48.0 4.22e-01 81.1% 90.5%
2b0aA00 3.50.30.50 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Putative cyclase 0.56 41.0 2.90e-01 81.1% 75.8%
1xhsA00 3.10.490.10 Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like 0.54 37.0 3.03e-01 77.4% 35.4%
5h7kA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 43.0 2.89e-01 96.2% 36.8%
1qmgB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 36.0 2.49e-01 73.6% 30.6%
5nfiB02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 2.97e-01 81.1% 83.5%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.51 36.0 2.34e-01 75.5% 21.9%
1zhvA00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.51 33.0 2.52e-01 81.1% 25.4%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 37.0 3.43e-01 83.0% 65.4%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4005331 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.90 70.0 7.26e-01 83.0% 90.0%
5001967 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.89 67.0 6.96e-01 81.1% 90.0%
3503896 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.89 63.0 6.79e-01 75.5% 91.1%
4959387 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.88 66.0 7.03e-01 79.2% 95.6%
5004764 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.86 60.0 6.48e-01 77.4% 86.7%
5027264 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.86 60.0 5.42e-01 77.4% 55.7%
5031005 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.85 66.0 6.54e-01 86.8% 80.0%
1948837 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.84 62.0 6.53e-01 77.4% 85.4%
3984485 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.84 74.0 6.36e-01 96.2% 67.5%
5031215 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.84 67.0 6.61e-01 88.7% 81.8%
4934374 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.84 60.0 6.18e-01 83.0% 80.0%
4085449 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.83 70.0 6.16e-01 90.6% 65.3%
5030713 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.82 61.0 5.72e-01 83.0% 64.6%
5031362 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.82 67.0 6.48e-01 98.1% 78.3%
4992345 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.82 59.0 6.37e-01 79.2% 91.1%
4933873 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.81 66.0 6.52e-01 88.7% 90.9%
4930879 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.81 59.0 6.12e-01 79.2% 88.0%
4993826 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.81 59.0 6.15e-01 77.4% 87.5%
5031928 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.81 66.0 6.54e-01 100.0% 85.5%
1104928 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.80 67.0 5.98e-01 92.5% 66.7%
4936825 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.80 60.0 6.21e-01 81.1% 86.0%
5073677 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.80 66.0 6.60e-01 98.1% 87.3%
5065699 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.80 59.0 6.31e-01 83.0% 93.3%
5001623 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.79 61.0 6.26e-01 83.0% 92.0%
5060420 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.79 59.0 6.29e-01 79.2% 95.6%
5027484 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.79 57.0 6.12e-01 77.4% 93.3%
5050062 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.79 63.0 6.09e-01 98.1% 76.7%
5032072 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.79 65.0 6.43e-01 100.0% 85.5%
3953985 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.79 58.0 6.18e-01 81.1% 93.3%
5065458 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.78 61.0 5.92e-01 86.8% 75.0%
5027722 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.78 56.0 5.93e-01 75.5% 93.3%
5074248 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.78 65.0 6.46e-01 94.3% 87.3%
5030593 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.78 66.0 6.54e-01 94.3% 94.5%
4982519 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.77 61.0 6.30e-01 90.6% 92.0%
4929551 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.77 59.0 5.54e-01 83.0% 67.7%
4966249 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.77 57.0 6.06e-01 83.0% 93.3%
5065651 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.77 63.0 6.29e-01 100.0% 87.3%
4967269 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.77 65.0 6.47e-01 100.0% 90.9%
4993775 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.77 59.0 5.91e-01 86.8% 81.8%
4955687 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.76 61.0 6.17e-01 100.0% 86.8%
4941025 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.76 57.0 5.87e-01 81.1% 87.8%
4991794 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.76 57.0 5.86e-01 81.1% 90.0%
4966339 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.76 65.0 6.28e-01 96.2% 86.7%
5031674 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.76 59.0 5.93e-01 88.7% 83.6%
5076168 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.76 62.0 5.36e-01 92.5% 63.5%
5029188 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.76 58.0 5.81e-01 88.7% 81.8%
5032935 304.8.1.112 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › MazE_antitoxin 0.75 58.0 4.27e-01 83.0% 32.6%
4639978 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.75 63.0 6.27e-01 94.3% 87.3%
5071519 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.75 63.0 5.90e-01 94.3% 80.0%
4955560 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.75 59.0 5.90e-01 86.8% 83.6%
4967853 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.75 57.0 5.68e-01 83.0% 80.0%
5012674 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.75 61.0 5.64e-01 96.2% 70.0%
5040491 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.75 62.0 5.69e-01 92.5% 81.4%
4934807 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.74 57.0 5.14e-01 84.9% 60.0%
4993713 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.74 60.0 6.01e-01 100.0% 87.3%
4969278 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.74 50.0 5.30e-01 75.5% 84.4%
4955487 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.74 54.0 5.73e-01 81.1% 93.3%
5014382 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.74 58.0 5.17e-01 88.7% 61.3%
5073758 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.74 54.0 5.68e-01 83.0% 93.3%
5081177 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.73 54.0 5.82e-01 84.9% 93.3%
5032296 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.73 61.0 6.05e-01 100.0% 89.1%
4967811 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.73 59.0 5.73e-01 98.1% 81.7%
5059683 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.72 54.0 5.56e-01 100.0% 88.0%
5072446 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.71 60.0 5.82e-01 94.3% 83.3%
4967881 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.71 59.0 5.87e-01 90.6% 90.7%
5070516 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.71 54.0 5.23e-01 83.0% 73.3%
4937994 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.71 49.0 5.34e-01 75.5% 97.5%
4994020 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.71 56.0 5.44e-01 86.8% 79.3%
5058860 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.71 55.0 5.49e-01 88.7% 85.5%
4986319 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.70 52.0 5.37e-01 88.7% 86.0%
5078945 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.70 51.0 4.78e-01 81.1% 63.1%
4992409 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.69 51.0 5.35e-01 81.1% 97.8%
5058522 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.69 56.0 5.46e-01 92.5% 89.7%
5079277 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.69 51.0 4.97e-01 83.0% 74.1%
5079669 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.66 58.0 5.82e-01 100.0% 96.4%
4534384 1.1.3.4 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › SymE_toxin 0.66 50.0 5.06e-01 83.0% 92.6%
4992628 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.65 50.0 4.97e-01 88.7% 90.9%
4967502 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.59 41.0 4.36e-01 77.4% 88.9%
4811950 866.1.1.1 ↗ a+b duplicates or obligate multimers › CheC-like › CheC-like › CheC-like › FliM 0.58 42.0 3.84e-01 79.2% 67.6%
4958959 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.55 38.0 3.98e-01 75.5% 88.9%
3799822 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.54 36.0 3.90e-01 75.5% 92.5%
4004145 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.52 38.0 2.58e-01 77.4% 30.2%