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OP172753.1__WAX11135.1__CB457P1_00097__00097

Bact-Vir

OP172753.1__WAX11135.1__CB457P1_00097__00097

Identity

Accession:
OP172753 ↗
Kingdom:
phage

Quality

79.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Enterocloster_phage_CB457P1

TaxID: 2968631

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-91
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5nj5A01 3.30.2290.10 Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily 0.63 44.0 3.19e-01 71.6% 78.0%
1vl4A01 3.30.2290.10 Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily 0.61 42.0 3.18e-01 71.6% 82.9%
1n7vA02 2.60.330.10 Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 0.60 38.0 3.39e-01 78.4% 44.7%
1lnsA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 49.0 3.46e-01 100.0% 80.4%
6nffA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 49.0 3.43e-01 100.0% 79.8%
1uzxA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.56 39.0 3.40e-01 98.9% 45.0%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.55 46.0 4.43e-01 97.7% 100.0%
3mwcA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 40.0 3.49e-01 78.4% 94.8%
1mkfA02 2.60.40.1340 Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like 0.54 40.0 3.28e-01 80.7% 50.6%
3cyjA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 42.0 3.74e-01 83.0% 95.9%
3aj3A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 47.0 3.36e-01 100.0% 59.0%
2z13A00 2.30.29.170 Mainly Beta › Roll › PH-domain like › 0.53 43.0 3.95e-01 89.8% 90.6%
1hwyA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.52 44.0 3.77e-01 95.5% 94.0%
5aj3E01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.52 36.0 3.72e-01 100.0% 77.8%
1r0mA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 39.0 3.51e-01 83.0% 95.4%
3i1iB01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 44.0 2.98e-01 100.0% 98.4%
1cx8A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.51 44.0 3.08e-01 100.0% 77.5%
5bkaE01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 34.0 2.97e-01 100.0% 46.2%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 32.0 3.25e-01 77.3% 62.6%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4972327 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.70 43.0 4.25e-01 100.0% 57.9%
3555102 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 52.0 4.76e-01 95.5% 99.2%
3432858 3459.1.1.3 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.62 45.0 3.88e-01 78.4% 97.9%
4045121 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.61 40.0 4.14e-01 94.3% 72.5%
3412900 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 52.0 4.78e-01 95.5% 99.1%
3781523 243.1.1.42 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MMU163 0.61 38.0 3.27e-01 98.9% 39.2%
4989302 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.60 41.0 3.10e-01 70.5% 82.4%
3470360 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 51.0 4.51e-01 97.7% 96.3%
3771672 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.59 49.0 4.25e-01 100.0% 58.5%
5025335 512.1.1.0 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.59 40.0 3.18e-01 70.5% 84.9%
3598219 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 51.0 4.63e-01 100.0% 100.0%
3608162 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.59 46.0 3.81e-01 86.4% 79.4%
3609858 220.1.1.14 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.58 43.0 4.09e-01 78.4% 82.9%
None — 0.57 46.0 2.93e-01 90.9% 22.2%
3575394 220.1.1.27 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.57 48.0 4.18e-01 100.0% 100.0%
3596842 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 42.0 3.79e-01 78.4% 72.5%
3882182 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.56 49.0 4.35e-01 100.0% 83.1%
3954692 9.4.1.0 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.56 42.0 3.96e-01 100.0% 65.7%
3693249 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 41.0 3.60e-01 78.4% 66.9%
3920843 71.1.1.14 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › GPCR_chapero_1 0.55 39.0 3.08e-01 100.0% 36.3%
3901826 5.1.4.78 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta 0.54 48.0 2.96e-01 98.9% 20.2%
3744012 5.1.4.16 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.54 46.0 3.08e-01 94.3% 23.9%
4989640 7512.1.1.24 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_5 0.54 47.0 3.31e-01 98.9% 29.8%
4346250 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.53 37.0 3.20e-01 71.6% 70.0%
4018089 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.53 36.0 3.35e-01 71.6% 79.2%
3591282 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.52 35.0 3.19e-01 93.2% 50.4%
3172477 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.52 38.0 3.32e-01 78.4% 77.1%
3094740 220.1.1.14 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.52 42.0 3.74e-01 94.3% 90.0%
3970009 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.52 36.0 2.96e-01 100.0% 37.9%
5048982 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 45.0 3.32e-01 98.9% 84.7%
4567161 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 46.0 3.60e-01 100.0% 89.2%