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OP172755.1__WAX11334.1__CB473P1_00047__00047
Bact-VirOP172755.1__WAX11334.1__CB473P1_00047__00047
Identity
- Accession:
- OP172755 ↗
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-58
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.77 | 57.0 | 5.82e-01 | 82.5% | 81.8% |
| 3n3fA01 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.76 | 54.0 | 5.99e-01 | 77.2% | 100.0% |
| 1yu0A01 | 2.10.10.30 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.70 | 48.0 | 5.01e-01 | 94.7% | 80.4% |
| 4dunA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.66 | 57.0 | 4.48e-01 | 100.0% | 75.6% |
| 5swcD00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.66 | 56.0 | 3.90e-01 | 98.2% | 80.1% |
| 3wknF00 | 6.20.50.120 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.64 | 40.0 | 4.36e-01 | 96.5% | 78.3% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.62 | 50.0 | 4.26e-01 | 91.2% | 64.6% |
| 1bwzA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.62 | 53.0 | 4.17e-01 | 100.0% | 78.7% |
| 2zyzB02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.60 | 46.0 | 4.03e-01 | 89.5% | 71.6% |
| 4wjsA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 50.0 | 3.11e-01 | 100.0% | 31.1% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 46.0 | 3.71e-01 | 94.7% | 43.9% |
| 1xo1A02 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.56 | 48.0 | 3.54e-01 | 98.2% | 81.1% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 48.0 | 3.04e-01 | 100.0% | 26.0% |
| 1a10I00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.56 | 37.0 | 3.69e-01 | 70.2% | 65.1% |
| 2rf5A00 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.55 | 39.0 | 2.81e-01 | 80.7% | 60.9% |
| 1cseI00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.55 | 36.0 | 3.59e-01 | 70.2% | 65.1% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 44.0 | 2.93e-01 | 100.0% | 29.7% |
| 4tjvA00 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.52 | 43.0 | 3.20e-01 | 94.7% | 54.5% |
| 1fblA02 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.51 | 43.0 | 3.04e-01 | 96.5% | 58.6% |
| 1genA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.50 | 43.0 | 3.02e-01 | 100.0% | 80.0% |
| 1y9lA00 | 2.40.128.230 | Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM | 0.50 | 34.0 | 2.84e-01 | 100.0% | 36.4% |
| 3i45A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 40.0 | 3.03e-01 | 100.0% | 42.2% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3987740 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.77 | 50.0 | 5.78e-01 | 75.4% | 95.0% |
| 1505155 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.77 | 57.0 | 5.78e-01 | 82.5% | 80.4% |
| 3474295 | 2004.5.1.3 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN | 0.75 | 56.0 | 3.65e-01 | 80.7% | 39.2% |
| 3528795 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.73 | 50.0 | 5.49e-01 | 80.7% | 91.1% |
| 3404254 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.70 | 60.0 | 4.51e-01 | 100.0% | 47.3% |
| 1107990 | 3761.1.1.1 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N | 0.70 | 48.0 | 5.04e-01 | 94.7% | 82.0% |
| 5049198 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.69 | 59.0 | 4.32e-01 | 100.0% | 79.1% |
| 3755942 | 223.2.1.37 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › C9orf72-like | 0.69 | 51.0 | 3.37e-01 | 80.7% | 47.9% |
| 3539914 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.68 | 60.0 | 4.20e-01 | 100.0% | 34.6% |
| 3501098 | 4126.1.1.1 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › Pro_CA | 0.67 | 57.0 | 3.78e-01 | 98.2% | 81.2% |
| 3972666 | 4126.1.1.1 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › Pro_CA | 0.67 | 58.0 | 3.90e-01 | 98.2% | 72.9% |
| 3481737 | 4126.1.1.1 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › Pro_CA | 0.67 | 56.0 | 3.72e-01 | 96.5% | 86.8% |
| 3218261 | 4126.1.1.1 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › Pro_CA | 0.66 | 56.0 | 3.73e-01 | 98.2% | 78.0% |
| None | — | 0.65 | 34.0 | 3.55e-01 | 78.9% | 50.9% | |
| 4551778 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.62 | 52.0 | 4.21e-01 | 100.0% | 78.9% |
| 3890372 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.62 | 50.0 | 4.05e-01 | 94.7% | 46.4% |
| 5011924 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 49.0 | 3.52e-01 | 94.7% | 79.0% |
| 3425089 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.61 | 52.0 | 3.37e-01 | 100.0% | 39.3% |
| 3467235 | 207.1.1.171 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2, LRR_R13L1-DRL21 | 0.61 | 50.0 | 3.13e-01 | 94.7% | 31.3% |
| 3352340 | 375.1.1.210 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF30904 | 0.60 | 40.0 | 4.11e-01 | 100.0% | 72.7% |
| 3620236 | 219.1.1.22 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Rad4 | 0.60 | 46.0 | 3.01e-01 | 84.2% | 59.6% |
| 3961441 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.59 | 40.0 | 3.73e-01 | 71.9% | 68.0% |
| 3715229 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.59 | 33.0 | 3.36e-01 | 77.2% | 49.1% |
| 4290860 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.59 | 51.0 | 3.49e-01 | 98.2% | 51.0% |
| 3368126 | 5.1.5.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF295 | 0.59 | 49.0 | 3.29e-01 | 100.0% | 37.5% |
| 3608123 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.58 | 50.0 | 3.05e-01 | 100.0% | 20.8% |
| 2495545 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.58 | 50.0 | 2.95e-01 | 100.0% | 12.3% |
| 3227198 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.57 | 48.0 | 3.83e-01 | 96.5% | 99.2% |
| 4028182 | 3939.1.1.185 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › WD40, Beta-prop_NOL10_N | 0.57 | 49.0 | 2.99e-01 | 100.0% | 19.0% |
| 4027092 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.57 | 44.0 | 3.63e-01 | 87.7% | 85.5% |
| 1693983 | 5.1.4.64 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › YNCE | 0.57 | 48.0 | 3.01e-01 | 100.0% | 34.9% |
| 3479249 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 47.0 | 2.92e-01 | 100.0% | 24.3% |
| 3478110 | 5.1.4.271 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 | 0.56 | 48.0 | 2.99e-01 | 100.0% | 21.1% |
| 4953503 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.56 | 47.0 | 3.31e-01 | 98.2% | 55.5% |
| 3849060 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 47.0 | 2.90e-01 | 100.0% | 25.8% |
| 3599654 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 44.0 | 2.52e-01 | 100.0% | 9.1% |
| 3178511 | 2003.1.4.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M | 0.54 | 45.0 | 3.26e-01 | 98.2% | 62.2% |
| 3427055 | 5.1.11.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_RIC1_2nd | 0.53 | 44.0 | 2.52e-01 | 100.0% | 10.9% |
| 3185947 | 5.1.4.271 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 | 0.53 | 46.0 | 2.71e-01 | 100.0% | 19.5% |
| 3584702 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.53 | 44.0 | 3.01e-01 | 100.0% | 38.8% |