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OP172757.1__WAX11573.1__CB473P3_00020__00020
Bact-VirOP172757.1__WAX11573.1__CB473P3_00020__00020
Identity
- Accession:
- OP172757 ↗
- Kingdom:
- phage
Quality
78.3
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 86-158
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6b9tF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 44.0 | 3.89e-01 | 86.3% | 49.5% |
| 1wapA00 | 2.60.40.50 | Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like | 0.60 | 47.0 | 4.83e-01 | 95.9% | 91.2% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 45.0 | 4.64e-01 | 80.8% | 100.0% |
| 4indA01 | 2.60.120.1320 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 46.0 | 3.71e-01 | 89.0% | 42.5% |
| 2bnmA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 43.0 | 3.73e-01 | 86.3% | 48.3% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 46.0 | 4.79e-01 | 84.9% | 97.0% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 43.0 | 4.43e-01 | 82.2% | 90.0% |
| 5u55A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 43.0 | 3.65e-01 | 87.7% | 49.2% |
| 1cauA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 47.0 | 3.57e-01 | 94.5% | 38.1% |
| 4qpwA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 42.0 | 3.48e-01 | 84.9% | 52.1% |
| 4fcaA01 | 2.60.120.1250 | Mainly Beta › Sandwich › Jelly Rolls › Peptidase M60, enhancin-like domain 1 | 0.55 | 46.0 | 4.09e-01 | 95.9% | 63.3% |
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 45.0 | 3.47e-01 | 94.5% | 38.8% |
| 6l4cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 45.0 | 3.43e-01 | 94.5% | 37.5% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 41.0 | 4.23e-01 | 82.2% | 91.2% |
| 1npsA00 | 2.60.20.10 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins | 0.53 | 41.0 | 3.91e-01 | 87.7% | 69.3% |
| 2qcsB02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 37.0 | 3.13e-01 | 95.9% | 42.4% |
| 3hzbC00 | 2.60.20.10 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins | 0.52 | 40.0 | 3.82e-01 | 87.7% | 70.5% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 35.0 | 3.51e-01 | 86.3% | 68.4% |
| 2qqkA02 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.51 | 41.0 | 3.62e-01 | 93.2% | 59.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5022462 | 304.134.1.3 ↗ | a+b two layers › Alpha-beta plaits › MJ1480-like › MJ1480-like › PF26798 | 0.63 | 52.0 | 4.93e-01 | 94.5% | 96.7% |
| 1209415 | 10.32.1.190 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › STIV_turret_1st | 0.60 | 46.0 | 3.69e-01 | 87.7% | 41.5% |
| 3501498 | 1.1.9.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › YTH | 0.59 | 42.0 | 3.21e-01 | 75.3% | 83.5% |
| 3279511 | 72.1.1.2 ↗ | beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like › Inhibitor_I36 | 0.59 | 42.0 | 4.04e-01 | 76.7% | 85.9% |
| 137947 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.58 | 44.0 | 4.62e-01 | 84.9% | 97.0% |
| 3948934 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.58 | 41.0 | 3.76e-01 | 90.4% | 56.0% |
| 4207556 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.57 | 44.0 | 4.47e-01 | 83.6% | 100.0% |
| 4662228 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.57 | 43.0 | 3.59e-01 | 87.7% | 46.2% |
| 1263580 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.57 | 44.0 | 4.43e-01 | 84.9% | 86.7% |
| 185742 | 10.25.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in peptidase M60 family › Jelly-roll domain in peptidase M60 family › M60-like_N | 0.56 | 46.0 | 4.09e-01 | 93.2% | 62.6% |
| 3231885 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 42.0 | 3.63e-01 | 86.3% | 62.4% |
| 3834078 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.55 | 43.0 | 3.24e-01 | 94.5% | 33.3% |
| 4019005 | 10.12.1.30 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 3-HAO | 0.54 | 47.0 | 4.39e-01 | 100.0% | 96.8% |
| 4007831 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.54 | 46.0 | 3.32e-01 | 100.0% | 43.2% |
| None | — | 0.54 | 46.0 | 3.59e-01 | 100.0% | 50.6% | |
| 378279 | 72.1.1.0 ↗ | beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like | 0.52 | 40.0 | 3.82e-01 | 87.7% | 70.5% |
D2
high
residues 165-220
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nqwB00 | 1.10.10.1320 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Anti-sigma factor, zinc-finger domain | 0.80 | 57.0 | 5.21e-01 | 75.0% | 68.5% |
| 8gpsA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.70 | 62.0 | 5.04e-01 | 100.0% | 55.2% |
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 54.0 | 5.32e-01 | 87.5% | 96.7% |
| 3m9lA02 | 1.10.260.80 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.65 | 44.0 | 4.63e-01 | 75.0% | 78.4% |
| 1ng6A01 | 1.10.1510.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain | 0.65 | 48.0 | 4.17e-01 | 82.1% | 79.1% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.65 | 56.0 | 3.87e-01 | 100.0% | 69.2% |
| 3kjxD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 41.0 | 4.06e-01 | 82.1% | 59.0% |
| 2dpmA02 | 1.10.1020.10 | Mainly Alpha › Orthogonal Bundle › Adenine-specific Methyltransferase; domain 2 › Adenine-specific Methyltransferase, Domain 2 | 0.63 | 46.0 | 3.87e-01 | 82.1% | 46.6% |
| 2o4cA03 | 3.30.1370.170 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Erythronate-4-phosphate dehydrogenase, dimerisation domain | 0.57 | 48.0 | 4.18e-01 | 94.6% | 89.8% |
| 6m5nA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 47.0 | 3.13e-01 | 100.0% | 54.8% |
| 4by6B00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.54 | 46.0 | 3.36e-01 | 100.0% | 59.6% |
| 4rg6A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 44.0 | 4.05e-01 | 100.0% | 72.7% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3291705 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.74 | 53.0 | 3.39e-01 | 76.8% | 42.6% |
| 4322551 | 604.23.1.0 ↗ | alpha bundles › Spectrin repeat-like › Sbi complement-binding domain › Sbi complement-binding domain | 0.70 | 48.0 | 4.86e-01 | 71.4% | 87.3% |
| 3560818 | 109.4.1.1497 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, CLASP_N, XMAP215_CLASP_TOG | 0.67 | 59.0 | 3.39e-01 | 100.0% | 21.7% |
| 3702226 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 58.0 | 3.87e-01 | 100.0% | 29.1% |
| 3241639 | 109.4.1.1436 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3, Rib_mS39_PPR | 0.65 | 56.0 | 3.21e-01 | 100.0% | 9.9% |
| 3518321 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 51.0 | 4.15e-01 | 92.9% | 75.7% |
| 3346414 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 52.0 | 3.81e-01 | 100.0% | 38.3% |
| 1712010 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 47.0 | 4.84e-01 | 89.3% | 94.3% |
| 3818652 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.61 | 51.0 | 4.15e-01 | 100.0% | 53.9% |
| 3818643 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 50.0 | 4.00e-01 | 100.0% | 52.0% |
| 4807757 | 109.4.1.1436 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3, Rib_mS39_PPR | 0.59 | 48.0 | 3.53e-01 | 100.0% | 32.2% |
| 3340385 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.56 | 45.0 | 3.54e-01 | 100.0% | 63.4% |