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OP172757.1__WAX11688.1__CB473P3_00135__00135
Bact-VirOP172757.1__WAX11688.1__CB473P3_00135__00135
Identity
- Accession:
- OP172757 ↗
- Kingdom:
- phage
Quality
77.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-41
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5jenA02 | 3.90.640.20 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › Heat-shock cognate protein, ATPase | 0.71 | 51.0 | 3.87e-01 | 84.6% | 31.3% |
| 3r2gA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 54.0 | 3.19e-01 | 87.2% | 14.2% |
| 1b69A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.70 | 46.0 | 3.88e-01 | 84.6% | 37.7% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.69 | 49.0 | 4.27e-01 | 89.7% | 48.4% |
| 3r4qA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.67 | 45.0 | 3.19e-01 | 87.2% | 21.2% |
| 3nwzB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.67 | 51.0 | 3.53e-01 | 89.7% | 51.7% |
| 2ysiA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.67 | 43.0 | 4.49e-01 | 87.2% | 72.7% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 44.0 | 3.91e-01 | 87.2% | 45.9% |
| 6gfaA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.65 | 42.0 | 3.82e-01 | 87.2% | 46.4% |
| 6guuA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 45.0 | 4.14e-01 | 87.2% | 55.6% |
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.62 | 41.0 | 3.09e-01 | 87.2% | 24.5% |
| 3vcaA02 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.62 | 49.0 | 3.56e-01 | 100.0% | 30.3% |
| 2pt7C01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.62 | 49.0 | 3.77e-01 | 100.0% | 44.3% |
| 2jiiA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 50.0 | 3.67e-01 | 100.0% | 33.6% |
| 6qcbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.59 | 40.0 | 3.12e-01 | 87.2% | 28.9% |
| 1b5eA00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.57 | 42.0 | 2.69e-01 | 87.2% | 84.6% |
| 1gccA00 | 3.30.730.10 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › AP2/ERF domain | 0.57 | 39.0 | 3.47e-01 | 84.6% | 46.0% |
| 3rmuA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 46.0 | 3.29e-01 | 100.0% | 50.7% |
| 3p26B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 50.0 | 3.70e-01 | 100.0% | 51.5% |
| 2ktyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 43.0 | 3.03e-01 | 92.3% | 25.4% |
| 1zj8A02 | 3.90.480.10 | Alpha Beta › Alpha-Beta Complex › Sulfite Reductase Hemoprotein; domain 2 › Sulfite Reductase Hemoprotein;Domain 2 | 0.56 | 43.0 | 3.08e-01 | 97.4% | 38.8% |
| 3zfnA02 | 2.30.140.40 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain | 0.55 | 44.0 | 3.99e-01 | 92.3% | 64.9% |
| 3luqB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 42.0 | 3.26e-01 | 100.0% | 44.7% |
| 6vilA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.55 | 44.0 | 3.12e-01 | 100.0% | 60.7% |
| 2yweA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 47.0 | 3.49e-01 | 97.4% | 48.0% |
| 1tjyA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 43.0 | 3.03e-01 | 100.0% | 26.4% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 40.0 | 3.12e-01 | 87.2% | 56.7% |
| 4evxA00 | 1.10.1740.240 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.55 | 36.0 | 2.71e-01 | 92.3% | 21.6% |
| 2g3mA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 38.0 | 3.02e-01 | 100.0% | 28.1% |
| 1txqA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.54 | 45.0 | 3.66e-01 | 94.9% | 50.0% |
| 3qsjA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 37.0 | 2.41e-01 | 79.5% | 41.4% |
| 3nrfA00 | 2.60.40.4110 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein of unknown function DUF4354 | 0.51 | 37.0 | 2.95e-01 | 89.7% | 74.5% |
| 1lmiA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 37.0 | 2.84e-01 | 97.4% | 41.2% |
| 3r5tA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.50 | 39.0 | 2.85e-01 | 87.2% | 96.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3580120 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.74 | 53.0 | 5.17e-01 | 100.0% | 70.5% |
| 3212139 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.69 | 54.0 | 5.45e-01 | 100.0% | 89.7% |
| 3597789 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.68 | 50.0 | 2.95e-01 | 89.7% | 10.0% |
| 3401731 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.66 | 51.0 | 3.30e-01 | 87.2% | 86.6% |
| 3942731 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.65 | 47.0 | 3.63e-01 | 89.7% | 34.4% |
| 4480497 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.64 | 53.0 | 4.36e-01 | 100.0% | 51.4% |
| 3893440 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.63 | 47.0 | 4.66e-01 | 89.7% | 79.1% |
| 3467141 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.63 | 43.0 | 3.15e-01 | 84.6% | 25.5% |
| 3679774 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.63 | 44.0 | 2.49e-01 | 100.0% | 6.0% |
| 3706839 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.62 | 54.0 | 4.00e-01 | 100.0% | 39.0% |
| 3598130 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.61 | 54.0 | 3.91e-01 | 100.0% | 37.1% |
| 3827127 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.61 | 40.0 | 3.09e-01 | 84.6% | 26.3% |
| 3419793 | 5.1.10.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF295 | 0.61 | 51.0 | 3.58e-01 | 97.4% | 52.6% |
| 3917309 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.61 | 50.0 | 2.97e-01 | 100.0% | 11.6% |
| 3686820 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 48.0 | 2.77e-01 | 100.0% | 20.5% |
| 4940212 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.57 | 39.0 | 3.75e-01 | 84.6% | 57.8% |
| 3620431 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 49.0 | 3.59e-01 | 100.0% | 48.2% |
| 3598222 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 49.0 | 4.10e-01 | 100.0% | 64.3% |
| 3287098 | 317.1.1.6 ↗ | a+b two layers › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › RamC_N | 0.56 | 44.0 | 2.98e-01 | 97.4% | 50.0% |
| 3371393 | 4266.2.1.1 ↗ | alpha bundles › Hyaluronidase domain-like › TTHA0068-like › TTHA0068-like › DUF309 | 0.56 | 45.0 | 2.87e-01 | 89.7% | 19.1% |
| 4224084 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.56 | 44.0 | 2.95e-01 | 100.0% | 23.2% |
| 5049978 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 41.0 | 2.79e-01 | 89.7% | 19.0% |
| 4012098 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 45.0 | 2.57e-01 | 100.0% | 17.0% |
| None | — | 0.55 | 39.0 | 2.41e-01 | 84.6% | 11.5% | |
| 3899009 | 209.1.1.4 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Xlink | 0.55 | 45.0 | 3.52e-01 | 100.0% | 41.1% |
| 4206331 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.54 | 43.0 | 3.68e-01 | 100.0% | 93.3% |
| 4178455 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.54 | 39.0 | 2.34e-01 | 84.6% | 10.9% |
| 4146985 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.54 | 46.0 | 3.42e-01 | 100.0% | 46.4% |
| 4330501 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.54 | 40.0 | 3.00e-01 | 89.7% | 29.2% |
| 3195939 | 230.1.1.0 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like | 0.54 | 43.0 | 2.95e-01 | 100.0% | 40.0% |
| 3908178 | 209.1.1.4 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Xlink | 0.53 | 44.0 | 3.36e-01 | 100.0% | 37.1% |
| 3583597 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 43.0 | 3.42e-01 | 100.0% | 47.8% |
| 4447486 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.52 | 39.0 | 3.27e-01 | 87.2% | 42.5% |
| 3255870 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.52 | 38.0 | 2.97e-01 | 87.2% | 32.4% |
| 3585671 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.51 | 42.0 | 3.97e-01 | 100.0% | 80.0% |
| 3690375 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.51 | 42.0 | 2.95e-01 | 100.0% | 43.6% |
| 3632875 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.51 | 40.0 | 2.21e-01 | 100.0% | 5.0% |
| 3214307 | 3256.1.1.0 ↗ | a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain | 0.50 | 34.0 | 3.54e-01 | 89.7% | 88.6% |