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OP172778.1__WAX12275.1__CS266P4_00007__00007

Bact-Vir

OP172778.1__WAX12275.1__CS266P4_00007__00007

Identity

Accession:
OP172778 ↗
Kingdom:
phage

Quality

95.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_CS266P4

TaxID: 2968625

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-90
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 44.0 5.33e-01 98.9% 92.7%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.70 42.0 4.87e-01 98.9% 88.1%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 41.0 4.79e-01 98.9% 87.9%
1oqkA00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.68 41.0 4.29e-01 100.0% 66.7%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 37.0 4.22e-01 86.4% 75.8%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 37.0 4.02e-01 100.0% 72.2%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 35.0 4.09e-01 100.0% 80.6%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 33.0 3.97e-01 100.0% 90.6%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.58 40.0 3.48e-01 100.0% 47.0%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.58 37.0 4.24e-01 100.0% 92.1%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.57 31.0 3.85e-01 100.0% 95.8%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 37.0 4.14e-01 100.0% 93.5%
1u0tA02 2.60.200.30 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 0.56 49.0 4.21e-01 100.0% 61.3%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.56 30.0 3.62e-01 94.3% 80.4%
3htnB00 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.54 38.0 3.29e-01 100.0% 46.8%
3fcgB00 2.60.40.3110 Mainly Beta › Sandwich › Immunoglobulin-like › Outer membrane usher protein 0.52 32.0 3.57e-01 84.1% 77.5%
2gtjA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 33.0 3.57e-01 100.0% 77.0%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 32.0 3.50e-01 100.0% 77.1%
4qycB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.64e-01 76.1% 99.0%
3kewB02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.51 42.0 3.63e-01 90.9% 73.6%
2yn3B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.92e-01 83.0% 90.1%
3sokB00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.50 34.0 2.93e-01 95.5% 43.0%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4505316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 44.0 5.21e-01 100.0% 88.3%
3696482 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 43.0 4.29e-01 100.0% 60.7%
4949848 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.66 35.0 4.23e-01 100.0% 81.8%
3660964 4.1.1.6 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.66 39.0 3.73e-01 100.0% 51.0%
3397690 395.1.1.3 ↗ few secondary structure elements › Midkine-related › Midkine-related › Midkine-related › JTB 0.61 36.0 4.16e-01 85.2% 85.0%
4161673 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.59 34.0 3.50e-01 100.0% 58.8%
4034031 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.58 39.0 4.44e-01 98.9% 92.3%
145285 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.58 34.0 3.77e-01 100.0% 75.8%
3740511 2.1.1.89 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term 0.57 34.0 3.40e-01 85.2% 56.7%
3855038 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.57 34.0 2.80e-01 100.0% 31.2%
4669788 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 38.0 3.32e-01 100.0% 46.9%
4208181 4.1.1.70 ↗ beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.56 38.0 4.21e-01 100.0% 93.8%
3478898 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 33.0 3.64e-01 100.0% 78.5%
3179422 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.54 34.0 3.05e-01 100.0% 44.0%
4033337 302.2.1.0 ↗ a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit 0.53 39.0 3.64e-01 79.5% 89.6%
3222210 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.52 33.0 3.61e-01 100.0% 80.0%
3614247 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 43.0 3.82e-01 89.8% 89.6%
3588189 12.1.1.4 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C 0.51 34.0 3.08e-01 100.0% 48.8%
3898952 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.51 33.0 3.58e-01 100.0% 78.7%
3514867 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.50 32.0 3.44e-01 100.0% 76.0%
3240833 207.1.1.52 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.50 37.0 2.66e-01 79.5% 35.4%