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OP172778.1__WAX12319.1__CS266P4_00051__00051

Bact-Vir

OP172778.1__WAX12319.1__CS266P4_00051__00051

Identity

Accession:
OP172778 ↗
Kingdom:
phage

Quality

93.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_CS266P4

TaxID: 2968625

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-99
PDB
Domain cluster: rep: OP056089.1__UYD72102.1__X__00002__D5-102
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 28.3 1.40e-06 39.6% 78.3%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.90 79.0 7.59e-01 100.0% 82.1%
4a2aA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.61 40.0 4.76e-01 74.0% 98.5%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 34.0 4.03e-01 70.8% 90.3%
1a73A00 3.90.75.10 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A 0.56 50.0 4.20e-01 97.9% 66.7%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 33.0 3.74e-01 82.3% 78.6%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.55 30.0 3.51e-01 81.2% 75.8%
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 27.0 3.22e-01 92.7% 72.9%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.53 31.0 3.72e-01 95.8% 96.4%
4xr7F02 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 35.0 3.62e-01 71.9% 84.4%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 30.0 3.46e-01 83.3% 87.7%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3586841 378.1.1.7 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 0.84 80.0 7.41e-01 99.0% 86.1%
3225123 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.57 28.0 3.74e-01 82.3% 97.8%
89916 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.57 50.0 4.21e-01 97.9% 66.7%
8233 378.1.1.6 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon 0.56 50.0 4.20e-01 97.9% 66.7%
4501723 4.8.1.45 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Peptidase_U57 0.55 32.0 3.94e-01 70.8% 100.0%
3988706 243.3.1.13 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 0.54 30.0 3.37e-01 84.4% 71.4%
3530891 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 36.0 3.52e-01 71.9% 65.1%
D2 high residues 119-178
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u3eM02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 60.0 5.77e-01 80.0% 79.4%
1o54A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.71 53.0 5.06e-01 81.7% 84.7%
3jxvA01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.68 51.0 4.07e-01 80.0% 74.1%
3jxvA02 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.66 49.0 3.92e-01 80.0% 74.4%
2kfwA01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.64 47.0 3.90e-01 80.0% 75.2%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 45.0 3.51e-01 80.0% 87.0%
1y4oA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.59 38.0 3.22e-01 100.0% 38.5%
3rkgA01 2.40.128.330 Mainly Beta › Beta Barrel › Lipocalin › 0.59 44.0 3.80e-01 80.0% 84.0%
7sqxA02 3.30.70.2150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 42.0 3.67e-01 80.0% 92.9%
3fsyB01 3.30.70.2010 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 42.0 3.39e-01 76.7% 55.6%
3of1A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 39.0 3.06e-01 80.0% 32.3%
2jgbA01 3.30.760.10 Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e 0.57 48.0 3.54e-01 98.3% 47.4%
3gtyX02 3.10.50.30 Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain 0.57 42.0 3.80e-01 80.0% 82.1%
4nbiB00 3.50.80.10 Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase 0.56 42.0 3.13e-01 80.0% 87.4%
2vpzA05 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.56 42.0 3.05e-01 80.0% 52.2%
3ewkA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 40.0 3.30e-01 76.7% 97.2%
4tweA02 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.56 39.0 2.67e-01 75.0% 97.4%
3volA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 42.0 3.15e-01 80.0% 76.1%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.55 41.0 3.71e-01 80.0% 83.1%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.55 41.0 3.28e-01 80.0% 69.7%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 40.0 3.22e-01 76.7% 88.4%
3fpwA01 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.55 41.0 3.22e-01 80.0% 73.6%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.55 41.0 3.29e-01 80.0% 71.9%
4jgpA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 41.0 3.52e-01 80.0% 92.4%
1oj5A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 39.0 3.25e-01 76.7% 94.3%
3nqhA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 40.0 3.09e-01 80.0% 41.2%
3ll3B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 45.0 3.03e-01 96.7% 51.8%
4clcA00 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.53 40.0 2.87e-01 80.0% 87.0%
4kqdB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 40.0 3.20e-01 80.0% 81.0%
2mctA00 2.60.40.4250 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 35.0 3.05e-01 70.0% 70.6%
2ykfA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 39.0 2.96e-01 80.0% 70.5%
3f1sB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 43.0 3.75e-01 93.3% 58.1%
6ixwB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 45.0 3.33e-01 96.7% 66.0%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.53 40.0 3.15e-01 80.0% 71.4%
3pr6A00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 39.0 2.95e-01 80.0% 55.2%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.52 38.0 3.69e-01 76.7% 95.5%
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 39.0 2.99e-01 80.0% 65.4%
4ew7A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 39.0 3.12e-01 78.3% 85.8%
5hwtB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 39.0 3.06e-01 80.0% 86.1%
1ywlA00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.51 43.0 3.75e-01 100.0% 93.8%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4384880 101.1.14.3 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.83 63.0 5.52e-01 80.0% 68.2%
4946799 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.69 43.0 3.52e-01 76.7% 34.5%
4414927 101.1.14.3 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.67 50.0 4.83e-01 81.7% 85.5%
3805835 4121.1.1.2 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like 0.61 51.0 3.45e-01 98.3% 85.3%
4944138 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 38.0 3.13e-01 96.7% 38.1%
3400352 379.1.1.0 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.57 43.0 4.50e-01 83.3% 90.7%
3215570 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.56 42.0 3.32e-01 80.0% 70.0%
4971324 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.56 42.0 3.59e-01 78.3% 94.4%
3634461 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.56 42.0 3.91e-01 80.0% 74.3%
5053230 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 42.0 3.31e-01 80.0% 69.2%
3473216 223.2.1.9 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.56 37.0 2.77e-01 100.0% 26.2%
4971701 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 40.0 3.37e-01 80.0% 46.0%
4356830 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 41.0 3.66e-01 80.0% 91.8%
4021858 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 40.0 3.34e-01 76.7% 69.0%
4976230 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 38.0 3.17e-01 100.0% 40.9%
4251848 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 39.0 2.88e-01 75.0% 54.5%
4977351 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 41.0 3.12e-01 80.0% 69.9%
4972333 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 41.0 3.18e-01 80.0% 67.2%
5006500 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.54 40.0 2.56e-01 78.3% 35.4%
5021970 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.54 39.0 3.29e-01 76.7% 81.0%
3394732 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.54 40.0 3.54e-01 80.0% 90.0%
4984108 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.54 40.0 3.15e-01 78.3% 71.7%
5045469 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.54 40.0 3.24e-01 80.0% 88.7%
5039180 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.54 40.0 2.67e-01 80.0% 37.8%
5048642 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.54 40.0 3.17e-01 80.0% 66.9%
5049432 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.54 40.0 2.47e-01 80.0% 28.9%
3387865 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.54 40.0 3.40e-01 78.3% 66.3%
4139591 223.2.1.32 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 0.53 39.0 2.87e-01 78.3% 65.0%
4979666 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 37.0 3.02e-01 100.0% 38.3%
1310612 223.1.1.91 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › TraJ 0.53 40.0 3.20e-01 80.0% 81.0%
4928032 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.53 38.0 2.95e-01 75.0% 59.4%
5050426 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.53 39.0 3.12e-01 78.3% 72.9%
3838661 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 39.0 3.40e-01 78.3% 68.9%
5046979 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 38.0 3.14e-01 76.7% 63.6%
4108884 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 39.0 3.15e-01 80.0% 85.8%
5079496 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 39.0 3.13e-01 78.3% 73.9%
183893 223.2.1.9 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.52 39.0 2.96e-01 80.0% 55.9%
3284156 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 38.0 3.39e-01 76.7% 100.0%
3723559 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.52 45.0 2.84e-01 100.0% 23.3%
3167797 223.5.1.1 ↗ a+b three layers › Profilin-like › YNR034W-A-like › YNR034W-A-like › YNR034W-A-like 0.52 39.0 3.69e-01 78.3% 92.9%
5077119 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 38.0 2.82e-01 76.7% 48.0%
3710918 223.2.1.9 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.52 38.0 2.63e-01 76.7% 66.8%
152511 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.52 39.0 3.12e-01 78.3% 85.8%
5017794 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 39.0 3.41e-01 80.0% 94.4%
3425254 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 39.0 2.98e-01 80.0% 90.4%
4324607 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.52 38.0 2.78e-01 78.3% 68.1%
5038686 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.52 45.0 3.58e-01 95.0% 74.8%
3593295 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 34.0 2.87e-01 100.0% 37.3%
3505375 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.59e-01 96.7% 74.8%
4944328 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 39.0 3.00e-01 80.0% 58.5%
5049764 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 39.0 3.10e-01 80.0% 68.7%
3783191 223.2.1.9 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.51 38.0 2.65e-01 80.0% 59.0%
4944923 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 36.0 2.90e-01 75.0% 62.3%
5055096 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 44.0 4.02e-01 96.7% 75.0%
4994168 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 44.0 3.60e-01 96.7% 55.5%
4956489 11.1.4.23 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.51 43.0 3.99e-01 96.7% 75.9%
5048238 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 38.0 2.88e-01 80.0% 57.1%
5036180 2492.1.1.0 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.50 43.0 3.67e-01 93.3% 76.8%
3950412 11.1.4.130 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF1416 0.50 43.0 3.98e-01 95.0% 78.7%
D3 high residues 184-242
PDB
Domain cluster: rep: AY682195.1__AAV35876.1__orf56__00056__D75-123
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u3eM02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 5.75e-01 88.1% 76.5%
3eipA00 3.10.50.20 Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein 0.68 56.0 4.99e-01 91.5% 98.8%
5vmzA03 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.65 41.0 4.74e-01 83.1% 95.0%
2lvhA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.63 42.0 4.69e-01 93.2% 91.1%
3bxwA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.63 47.0 4.89e-01 81.4% 100.0%
1ui0A00 3.40.470.10 Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain 0.63 45.0 3.20e-01 78.0% 66.1%
2ff4A03 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.61 50.0 4.39e-01 98.3% 98.0%
6hoyA02 2.20.28.200 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.59 40.0 4.35e-01 81.4% 85.7%
1wh2A01 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.59 38.0 3.85e-01 86.4% 63.9%
4ba0A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 33.0 3.47e-01 79.7% 66.7%
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.56 44.0 4.01e-01 89.8% 76.8%
3a43B02 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.55 32.0 3.98e-01 83.1% 100.0%
2ed8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 39.0 3.49e-01 89.8% 53.5%
3mwmA02 3.30.1490.190 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain 0.54 28.0 2.97e-01 100.0% 50.0%
4nzjA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 33.0 2.94e-01 88.1% 43.7%
2f2hA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 29.0 3.20e-01 78.0% 66.7%
1ln0A00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.51 44.0 3.82e-01 96.6% 82.6%
3r7wC02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 38.0 3.27e-01 86.4% 89.7%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4519945 101.1.14.4 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › PF31232 0.84 65.0 6.83e-01 83.1% 100.0%
3171408 101.1.14.3 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.82 64.0 6.93e-01 83.1% 100.0%
3058113 101.1.14.0 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases 0.82 62.0 6.58e-01 86.4% 90.4%
3886999 386.1.1.20 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.64 39.0 4.49e-01 79.7% 90.0%
3766036 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.62 42.0 4.10e-01 88.1% 63.1%
3581478 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.62 41.0 4.17e-01 98.3% 68.3%
3675525 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 41.0 3.92e-01 89.8% 61.8%
3480425 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 30.0 3.78e-01 81.4% 85.7%
3573611 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 30.0 3.92e-01 81.4% 100.0%
3958113 2007.1.19.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like 0.58 49.0 3.17e-01 100.0% 37.4%
3708288 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 31.0 3.79e-01 83.1% 88.6%
4008034 223.1.1.113 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30408 0.57 40.0 2.98e-01 74.6% 36.5%
3233799 375.1.1.146 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CCCH_Mcm10 0.57 32.0 3.78e-01 91.5% 82.5%
3921390 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 43.0 3.56e-01 88.1% 45.7%
3719787 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 37.0 4.41e-01 81.4% 100.0%
3622513 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 45.0 4.55e-01 88.1% 98.3%
4967657 375.1.1.325 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › OapC 0.56 37.0 4.03e-01 96.6% 91.1%
3172869 2003.1.1.48 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N 0.55 39.0 2.57e-01 76.3% 100.0%
3245932 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 36.0 4.04e-01 81.4% 88.9%
4600774 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 41.0 4.25e-01 83.1% 98.2%
3843603 904.1.1.1 ↗ few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.54 35.0 2.55e-01 100.0% 22.3%
5065494 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.53 33.0 3.49e-01 81.4% 72.0%
3223367 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 40.0 3.96e-01 86.4% 96.9%
3407954 386.1.1.24 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 0.53 44.0 3.87e-01 93.2% 77.8%
3815248 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.53 42.0 3.00e-01 96.6% 30.7%
3206963 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.52 41.0 2.60e-01 86.4% 17.3%
4268554 375.1.1.1 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 0.52 40.0 3.66e-01 86.4% 80.0%
3616359 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 38.0 3.55e-01 100.0% 62.5%
4470809 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 37.0 3.71e-01 79.7% 98.3%
3820603 375.1.1.18 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SIR2 0.50 38.0 3.06e-01 81.4% 72.2%