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OP172780.1__WAX12478.1__EC55P1_00086__00086
Bact-VirOP172780.1__WAX12478.1__EC55P1_00086__00086
Identity
- Accession:
- OP172780 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Cluster
View cluster (15 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-68
Domain cluster:
rep: OQ504960.1__WID41994.1__X__00022__D3-68
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 53.0 | 5.41e-01 | 97.0% | 72.7% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 51.0 | 5.39e-01 | 94.0% | 76.7% |
| 5eh1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.73 | 45.0 | 4.02e-01 | 100.0% | 44.2% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.68 | 50.0 | 4.23e-01 | 100.0% | 47.7% |
| 2mv2A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.66 | 44.0 | 3.41e-01 | 100.0% | 31.1% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.66 | 50.0 | 4.45e-01 | 100.0% | 57.3% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 45.0 | 3.94e-01 | 100.0% | 49.0% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.65 | 47.0 | 4.91e-01 | 95.5% | 85.0% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.65 | 43.0 | 4.72e-01 | 100.0% | 92.0% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 53.0 | 5.18e-01 | 97.0% | 82.2% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.64 | 49.0 | 4.33e-01 | 100.0% | 57.1% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 52.0 | 5.26e-01 | 97.0% | 88.2% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.62 | 48.0 | 3.93e-01 | 100.0% | 45.8% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.62 | 51.0 | 4.29e-01 | 100.0% | 55.0% |
| 3in6A02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 46.0 | 3.85e-01 | 100.0% | 46.2% |
| 2mvzA00 | 2.40.100.10 | Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like | 0.61 | 54.0 | 4.23e-01 | 100.0% | 98.6% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 42.0 | 3.59e-01 | 100.0% | 46.4% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.58 | 44.0 | 3.62e-01 | 100.0% | 45.1% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.58 | 49.0 | 4.06e-01 | 100.0% | 52.9% |
| 3b8fB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.57 | 43.0 | 3.33e-01 | 100.0% | 37.3% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 41.0 | 3.98e-01 | 100.0% | 71.1% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 44.0 | 3.83e-01 | 100.0% | 54.7% |
| 4jzjC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 3.54e-01 | 100.0% | 50.0% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.56 | 38.0 | 3.72e-01 | 100.0% | 63.2% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.56 | 39.0 | 3.65e-01 | 85.1% | 59.0% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.53 | 37.0 | 3.44e-01 | 100.0% | 55.4% |
| 1yk9A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.53 | 46.0 | 3.39e-01 | 100.0% | 54.9% |
| 6n6qD00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 41.0 | 2.61e-01 | 92.5% | 74.1% |
| 2cs7A00 | 3.10.50.90 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 36.0 | 3.88e-01 | 88.1% | 87.3% |
| 3bjoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 3.45e-01 | 83.6% | 89.3% |
| 2bf1A00 | 2.170.40.20 | Mainly Beta › Beta Complex › HIV Envelope Protein Gp120; Chain G › Human immunodeficiency virus 1, Gp160, envelope glycoprotein | 0.51 | 38.0 | 2.60e-01 | 83.6% | 98.7% |
| 3u5eU00 | 3.30.1360.210 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.50 | 45.0 | 3.92e-01 | 100.0% | 89.0% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3959440 | 4.1.1.180 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3107 | 0.79 | 69.0 | 7.05e-01 | 98.5% | 100.0% |
| 3972526 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 67.0 | 6.67e-01 | 98.5% | 91.4% |
| 4448678 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.78 | 71.0 | 6.82e-01 | 100.0% | 97.3% |
| 5063433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 53.0 | 6.05e-01 | 98.5% | 98.0% |
| 4231372 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.76 | 68.0 | 6.77e-01 | 100.0% | 100.0% |
| 5004476 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 53.0 | 5.41e-01 | 100.0% | 76.9% |
| 3036710 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 52.0 | 5.43e-01 | 100.0% | 79.4% |
| 4941512 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 50.0 | 4.91e-01 | 97.0% | 67.1% |
| 4302032 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.71 | 53.0 | 5.45e-01 | 98.5% | 81.5% |
| 4088209 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.71 | 52.0 | 5.34e-01 | 98.5% | 80.0% |
| 4185009 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.71 | 53.0 | 5.42e-01 | 98.5% | 81.5% |
| 4104821 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.70 | 52.0 | 5.07e-01 | 98.5% | 70.7% |
| 4149821 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 48.0 | 5.03e-01 | 98.5% | 80.0% |
| 5017559 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 60.0 | 6.16e-01 | 97.0% | 100.0% |
| 4505797 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.69 | 51.0 | 5.22e-01 | 98.5% | 81.5% |
| 3588755 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 59.0 | 5.71e-01 | 100.0% | 87.8% |
| 4286562 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 50.0 | 5.09e-01 | 98.5% | 81.5% |
| 4212091 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.66 | 50.0 | 5.13e-01 | 100.0% | 83.1% |
| 4158495 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.66 | 47.0 | 4.28e-01 | 100.0% | 56.7% |
| 4985746 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 36.0 | 3.14e-01 | 86.6% | 35.2% |
| 3289401 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.64 | 44.0 | 3.57e-01 | 100.0% | 37.7% |
| 3718648 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 38.0 | 3.24e-01 | 83.6% | 36.1% |
| 5006875 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 38.0 | 3.36e-01 | 85.1% | 40.8% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.62 | 39.0 | 4.47e-01 | 100.0% | 95.6% |
| 3272931 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.61 | 35.0 | 3.07e-01 | 100.0% | 35.2% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.61 | 38.0 | 4.39e-01 | 100.0% | 95.6% |
| 4271892 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.61 | 52.0 | 4.21e-01 | 100.0% | 50.4% |
| 3722424 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.59 | 54.0 | 4.71e-01 | 100.0% | 84.0% |
| 4015057 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 54.0 | 4.65e-01 | 98.5% | 85.0% |
| 4387111 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.59 | 52.0 | 4.92e-01 | 97.0% | 85.0% |
| 3783266 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.57 | 40.0 | 3.37e-01 | 76.1% | 79.2% |
| 5053654 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 37.0 | 3.11e-01 | 85.1% | 37.5% |
| 4007508 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.56 | 39.0 | 4.38e-01 | 100.0% | 100.0% |
| 3959955 | 304.163.1.3 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 | 0.56 | 36.0 | 4.21e-01 | 100.0% | 97.8% |
| 3939200 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.56 | 49.0 | 3.97e-01 | 100.0% | 90.0% |
| 3216210 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.55 | 38.0 | 4.07e-01 | 100.0% | 98.0% |
| 3615237 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.55 | 43.0 | 2.75e-01 | 100.0% | 16.1% |
| 4008398 | 101.1.2.583 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27264 | 0.55 | 36.0 | 3.63e-01 | 79.1% | 65.7% |
| 3282232 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 35.0 | 2.77e-01 | 86.6% | 29.3% |
| 3760983 | 3335.1.1.3 ↗ | beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › KCTD18_C | 0.55 | 49.0 | 4.30e-01 | 100.0% | 99.0% |
| 3506058 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.54 | 43.0 | 3.83e-01 | 100.0% | 60.0% |
| 3596155 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 36.0 | 3.12e-01 | 70.1% | 93.9% |
| 4903854 | 4.1.1.16 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L6e,Ribosomal_L6e_N | 0.53 | 38.0 | 2.94e-01 | 98.5% | 31.3% |
| 3895653 | 221.1.1.50 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF4430 | 0.53 | 47.0 | 4.07e-01 | 100.0% | 89.3% |
| 3391637 | 223.1.1.77 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Intu_longin_3 | 0.52 | 38.0 | 3.38e-01 | 79.1% | 97.1% |
| 3261577 | 543.1.1.6 ↗ | few secondary structure elements › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › PF29739 | 0.52 | 39.0 | 3.16e-01 | 86.6% | 100.0% |
| 1688016 | 220.3.1.3 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Glycoprot_B_PH1 | 0.50 | 41.0 | 3.08e-01 | 100.0% | 89.9% |