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OP172781.1__WAX12501.1__EC55P2_00011__00011

Bact-Vir

OP172781.1__WAX12501.1__EC55P2_00011__00011

Identity

Accession:
OP172781 ↗
Kingdom:
phage

Quality

87.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Enterococcus_phage_EC55P2

TaxID: 2968639

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-76
PDB
Domain cluster: rep: MT939240.1__QOC57461.1__phi9181_ORF091__00091__D3-61
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4necC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 49.0 3.52e-01 79.7% 85.4%
3sonA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.63 49.0 4.01e-01 86.5% 63.7%
4fsdA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 44.0 3.11e-01 74.3% 45.3%
1ryaA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.60 47.0 3.73e-01 87.8% 70.0%
2o1cA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.59 45.0 3.69e-01 85.1% 66.7%
1v6eA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 45.0 4.40e-01 86.5% 98.8%
2p8jA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 41.0 3.03e-01 79.7% 93.2%
1vkyB01 3.40.1780.10 Alpha Beta › 3-Layer(aba) Sandwich › QueA-like › QueA-like 0.55 44.0 3.27e-01 90.5% 91.3%
3ec7A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 37.0 3.23e-01 73.0% 54.9%
1h4uA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.54 42.0 3.02e-01 87.8% 50.2%
3sm3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 37.0 2.76e-01 74.3% 93.4%
5uayA01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.52 44.0 4.32e-01 97.3% 96.3%
5ccbA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 40.0 3.07e-01 89.2% 93.3%
1wx8A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 41.0 3.85e-01 89.2% 76.0%
1ne2B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 36.0 2.83e-01 77.0% 85.2%
2i62A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 36.0 2.61e-01 77.0% 82.1%
1v86A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 40.0 3.71e-01 86.5% 73.7%
4h3uA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 42.0 3.57e-01 97.3% 80.8%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5015075 221.12.1.0 ↗ a+b two layers › beta-Grasp 0.68 48.0 5.12e-01 98.6% 91.7%
3421793 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.66 52.0 4.05e-01 87.8% 66.9%
3675550 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.65 51.0 4.00e-01 86.5% 72.7%
3692188 3541.1.1.0 ↗ beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 0.64 50.0 4.29e-01 82.4% 100.0%
3964102 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.64 50.0 4.13e-01 86.5% 68.6%
3671130 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.60 46.0 3.56e-01 85.1% 48.3%
3164781 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.59 46.0 3.74e-01 86.5% 66.0%
3937064 221.4.1.7 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › MRP-L46 0.57 46.0 3.21e-01 89.2% 81.4%
3630477 221.4.1.7 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › MRP-L46 0.56 46.0 3.22e-01 93.2% 77.8%
4986259 2003.1.5.55 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.55 40.0 3.03e-01 79.7% 82.9%
4988478 2003.1.5.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.54 40.0 2.70e-01 79.7% 70.7%
3719503 2004.1.1.26 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin 0.54 46.0 2.99e-01 100.0% 44.3%
3895480 810.1.1.2 ↗ a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › GGACT 0.54 42.0 3.51e-01 89.2% 80.7%
4943012 810.1.1.0 ↗ a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) 0.53 40.0 3.43e-01 83.8% 91.5%
3594207 243.1.1.2 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.52 45.0 3.72e-01 100.0% 81.4%
3255519 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.52 40.0 3.21e-01 83.8% 52.9%
3610658 243.1.1.2 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.52 45.0 3.60e-01 100.0% 73.8%
1507020 304.51.1.7 ↗ a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 0.52 37.0 2.99e-01 77.0% 64.4%
3957486 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.52 45.0 3.92e-01 100.0% 81.7%