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OP172786.1__WAX13405.1__ECO07P3_00128__00128
Bact-VirOP172786.1__WAX13405.1__ECO07P3_00128__00128
Identity
- Accession:
- OP172786 ↗
- Kingdom:
- phage
Quality
84.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Tequatrovirus›
Escherichia_phage_ECO07P3
TaxID: 2968659
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-80
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26861.1 best | Phage_T4_IpIII | 117.6 | 7.60e-34 | 98.6% | 36.5% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tl4X02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.78 | 64.0 | 6.37e-01 | 100.0% | 86.1% |
| 4ye6A02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.73 | 56.0 | 6.04e-01 | 95.7% | 100.0% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.72 | 58.0 | 5.43e-01 | 100.0% | 70.8% |
| 2vwaA00 | 1.20.58.1330 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Plasmodium falciparum UIS3 membrane protein | 0.67 | 58.0 | 5.25e-01 | 100.0% | 71.7% |
| 3vkgA15 | 1.10.8.1220 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 43.0 | 3.97e-01 | 72.9% | 73.4% |
| 3e2dA03 | 1.10.1200.140 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Alkaline phosphatase, crown domain | 0.62 | 41.0 | 4.30e-01 | 82.9% | 78.7% |
| 5iduA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.61 | 53.0 | 4.50e-01 | 100.0% | 63.3% |
| 2m4eA00 | 1.20.120.1930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family | 0.59 | 44.0 | 4.14e-01 | 80.0% | 72.1% |
| 1wjtA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.58 | 39.0 | 3.50e-01 | 94.3% | 48.5% |
| 4aidA02 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.57 | 49.0 | 4.74e-01 | 100.0% | 87.8% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.57 | 43.0 | 4.67e-01 | 85.7% | 100.0% |
| 6t0bc02 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.56 | 49.0 | 3.61e-01 | 100.0% | 90.6% |
| 1tfkB00 | 1.20.120.650 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Colicin D | 0.56 | 40.0 | 3.75e-01 | 92.9% | 61.6% |
| 4dk4B00 | 1.10.4010.10 | Mainly Alpha › Orthogonal Bundle › all-alpha NTP pyrophosphatase fold › Type II deoxyuridine triphosphatase | 0.55 | 41.0 | 3.02e-01 | 82.9% | 55.8% |
| 3e7qA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 49.0 | 3.52e-01 | 100.0% | 51.4% |
| 3fmsA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.55 | 49.0 | 3.91e-01 | 100.0% | 72.3% |
| 4m9aA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 47.0 | 4.06e-01 | 100.0% | 63.0% |
| 2pjzA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 41.0 | 2.84e-01 | 84.3% | 69.7% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5065754 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.66 | 56.0 | 3.88e-01 | 97.1% | 65.2% |
| 4150540 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.63 | 55.0 | 5.18e-01 | 100.0% | 82.4% |
| 4361153 | 298.4.1.1 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E | 0.62 | 41.0 | 3.46e-01 | 95.7% | 38.2% |
| 3854329 | 197.1.1.3 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › ACBP | 0.61 | 40.0 | 3.35e-01 | 100.0% | 36.2% |
| 223746 | 6099.1.1.1 ↗ | alpha arrays › Uncharacterized protein VV2_0175 › Uncharacterized protein VV2_0175 › Uncharacterized protein VV2_0175 › DUF5062 | 0.59 | 44.0 | 4.14e-01 | 80.0% | 72.1% |
| 3975800 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.58 | 47.0 | 3.11e-01 | 92.9% | 51.1% |
| 3737551 | 109.4.1.954 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EF3_N | 0.58 | 44.0 | 3.13e-01 | 100.0% | 25.3% |
| 4275096 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.55 | 47.0 | 3.32e-01 | 98.6% | 97.9% |
| 4790111 | 6110.1.1.1 ↗ | alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 | 0.53 | 45.0 | 3.17e-01 | 100.0% | 28.3% |
| 3260744 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.53 | 43.0 | 2.88e-01 | 100.0% | 60.3% |
| 3281932 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.52 | 46.0 | 3.67e-01 | 100.0% | 77.2% |
| 4016566 | 2003.1.5.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 | 0.52 | 43.0 | 2.99e-01 | 97.1% | 84.5% |
| 3394470 | 193.1.1.0 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like | 0.51 | 38.0 | 3.44e-01 | 84.3% | 84.8% |
| 3742018 | 7094.1.1.2 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › LIS_MGM1 | 0.51 | 40.0 | 3.59e-01 | 84.3% | 69.5% |
| 3889971 | 109.4.1.1643 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RSLD_CPSF6 | 0.50 | 40.0 | 3.58e-01 | 100.0% | 59.1% |