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OP172803.1__WAX15722.1__EG103P3_00053__00053
Bact-VirOP172803.1__WAX15722.1__EG103P3_00053__00053
Identity
- Accession:
- OP172803 ↗
- Kingdom:
- phage
Quality
94.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-62
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v8qB00 | 6.20.250.60 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.68 | 46.0 | 4.33e-01 | 70.7% | 72.6% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.66 | 57.0 | 4.38e-01 | 100.0% | 46.4% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.65 | 46.0 | 4.63e-01 | 81.0% | 71.7% |
| 2i9wA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 47.0 | 3.34e-01 | 79.3% | 65.3% |
| 3d9wA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.61 | 41.0 | 3.47e-01 | 100.0% | 40.2% |
| 4f78A01 | 3.30.200.180 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.61 | 49.0 | 4.12e-01 | 91.4% | 76.0% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 47.0 | 3.41e-01 | 86.2% | 55.6% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.60 | 53.0 | 3.79e-01 | 98.3% | 84.8% |
| 3nuhB03 | 3.10.20.690 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.59 | 50.0 | 4.48e-01 | 100.0% | 71.9% |
| 1t9mA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 52.0 | 3.58e-01 | 100.0% | 76.5% |
| 1dfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 48.0 | 3.39e-01 | 87.9% | 71.7% |
| 2kt4B01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 41.0 | 3.12e-01 | 75.9% | 32.4% |
| 2uvaG07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.58 | 47.0 | 3.66e-01 | 93.1% | 42.6% |
| 3akoC00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.57 | 49.0 | 3.70e-01 | 100.0% | 47.7% |
| 4o8sA01 | 3.10.450.620 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain | 0.57 | 47.0 | 3.83e-01 | 100.0% | 69.6% |
| 2l5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 46.0 | 3.25e-01 | 87.9% | 72.6% |
| 1p9rA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.57 | 48.0 | 3.98e-01 | 98.3% | 86.5% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 44.0 | 3.81e-01 | 91.4% | 54.9% |
| 2be3B01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.56 | 46.0 | 3.69e-01 | 100.0% | 74.1% |
| 1jg1A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 41.0 | 2.85e-01 | 89.7% | 21.9% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 39.0 | 3.38e-01 | 82.8% | 45.7% |
| 1g5hA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 44.0 | 2.98e-01 | 100.0% | 51.9% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 46.0 | 3.97e-01 | 98.3% | 97.0% |
| 6euaA01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.55 | 41.0 | 3.17e-01 | 82.8% | 39.6% |
| 3jvvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 46.0 | 3.95e-01 | 98.3% | 96.0% |
| 2ewvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 43.0 | 3.72e-01 | 98.3% | 96.1% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.51 | 40.0 | 3.01e-01 | 96.6% | 90.6% |
| 2ci8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 37.0 | 3.78e-01 | 87.9% | 83.9% |
| 1s67L00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 42.0 | 3.46e-01 | 100.0% | 66.4% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.50 | 41.0 | 2.96e-01 | 94.8% | 76.6% |
| 3u2aA00 | 3.30.450.310 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 43.0 | 3.57e-01 | 100.0% | 64.3% |
| 6x6aA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 42.0 | 2.80e-01 | 100.0% | 20.6% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 37.0 | 2.76e-01 | 82.8% | 31.3% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 41.0 | 2.79e-01 | 98.3% | 21.5% |
| 1i7dA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.50 | 43.0 | 3.27e-01 | 96.6% | 75.2% |
| 2gq0B01 | 3.30.230.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.50 | 33.0 | 2.45e-01 | 94.8% | 23.4% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3407532 | 4.1.1.326 ↗ | beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 | 0.73 | 47.0 | 5.01e-01 | 74.1% | 76.0% |
| 4629115 | 12.6.1.10 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › PF29200 | 0.73 | 47.0 | 4.52e-01 | 79.3% | 58.5% |
| 3721942 | 4086.1.1.1 ↗ | a+b two layers › AMPKBI-like › AMPKBI-like › AMPKBI-like › AMPKBI | 0.72 | 49.0 | 4.00e-01 | 70.7% | 60.0% |
| 3292852 | 4086.1.1.1 ↗ | a+b two layers › AMPKBI-like › AMPKBI-like › AMPKBI-like › AMPKBI | 0.72 | 48.0 | 4.12e-01 | 70.7% | 68.4% |
| 3016724 | 244.1.1.12 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Smoa_sbd | 0.67 | 44.0 | 3.64e-01 | 86.2% | 37.1% |
| 3591940 | 223.2.1.19 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 | 0.66 | 52.0 | 3.70e-01 | 100.0% | 26.8% |
| 3467207 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.65 | 57.0 | 4.65e-01 | 100.0% | 79.1% |
| 3175033 | 4086.1.1.1 ↗ | a+b two layers › AMPKBI-like › AMPKBI-like › AMPKBI-like › AMPKBI | 0.64 | 49.0 | 4.19e-01 | 81.0% | 74.4% |
| 3239005 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.64 | 51.0 | 3.10e-01 | 98.3% | 12.8% |
| 2323823 | 3256.1.1.0 ↗ | a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain | 0.64 | 37.0 | 4.22e-01 | 86.2% | 84.2% |
| 3960581 | 4091.1.1.0 ↗ | beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like | 0.62 | 44.0 | 3.41e-01 | 84.5% | 33.3% |
| 4176400 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.60 | 48.0 | 4.51e-01 | 100.0% | 72.0% |
| 4937410 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.60 | 45.0 | 3.81e-01 | 81.0% | 72.6% |
| 3715021 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.59 | 50.0 | 3.56e-01 | 98.3% | 31.4% |
| 4936766 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.59 | 49.0 | 3.59e-01 | 94.8% | 75.9% |
| 3851797 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.59 | 47.0 | 3.44e-01 | 89.7% | 72.1% |
| 3267754 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.58 | 46.0 | 3.62e-01 | 98.3% | 40.8% |
| 4859328 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.58 | 49.0 | 3.82e-01 | 100.0% | 45.7% |
| 4878467 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.57 | 49.0 | 4.23e-01 | 100.0% | 66.7% |
| 3971224 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 49.0 | 3.36e-01 | 100.0% | 36.0% |
| 5028953 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.57 | 43.0 | 3.73e-01 | 81.0% | 73.3% |
| 3548672 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.57 | 46.0 | 3.36e-01 | 89.7% | 76.8% |
| 3964724 | 3675.1.1.1 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert | 0.56 | 47.0 | 3.57e-01 | 100.0% | 39.4% |
| 3436743 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.56 | 40.0 | 2.58e-01 | 79.3% | 31.6% |
| 4031750 | 274.1.1.25 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF | 0.56 | 43.0 | 3.56e-01 | 98.3% | 47.5% |
| 3386302 | 3186.1.1.1 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook | 0.56 | 44.0 | 4.00e-01 | 96.6% | 62.4% |
| 3750856 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.55 | 46.0 | 2.96e-01 | 100.0% | 77.8% |
| 2554619 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.55 | 46.0 | 2.92e-01 | 98.3% | 26.9% |
| None | — | 0.55 | 40.0 | 3.01e-01 | 89.7% | 29.4% | |
| 4927872 | 330.2.1.5 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 | 0.55 | 42.0 | 3.29e-01 | 81.0% | 53.3% |
| 3926066 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.54 | 44.0 | 3.48e-01 | 100.0% | 66.2% |
| 3501948 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.54 | 45.0 | 3.24e-01 | 100.0% | 45.1% |
| 3647918 | 719.1.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XRCC4 | 0.54 | 42.0 | 3.25e-01 | 82.8% | 40.8% |
| 3629240 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.54 | 39.0 | 3.27e-01 | 87.9% | 42.7% |
| 3479080 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.53 | 37.0 | 3.32e-01 | 75.9% | 69.3% |
| 5067760 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.52 | 43.0 | 3.87e-01 | 100.0% | 77.8% |
| 3922554 | 827.1.1.1 ↗ | a+b two layers › Integrin beta tail domain › Integrin beta tail domain › Integrin beta tail domain › Integrin_B_tail | 0.52 | 39.0 | 3.54e-01 | 86.2% | 98.8% |
| 4872853 | 330.2.1.1 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE | 0.51 | 41.0 | 3.57e-01 | 94.8% | 86.3% |
| 3081033 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.51 | 40.0 | 3.21e-01 | 89.7% | 86.6% |
| 4108772 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.51 | 41.0 | 3.82e-01 | 96.6% | 70.7% |