Back to structures

OP172803.1__WAX15724.1__EG103P3_00055__00055

Bact-Vir

OP172803.1__WAX15724.1__EG103P3_00055__00055

Identity

Accession:
OP172803 ↗
Kingdom:
phage

Quality

88.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-123
PDB
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2q7nA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.78 44.0 4.78e-01 81.8% 66.3%
2pn5A05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.78 42.0 4.75e-01 76.9% 67.7%
4g5aA00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.76 38.0 4.15e-01 75.2% 58.6%
1b4rA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.75 36.0 4.35e-01 79.3% 68.8%
3tp4B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.75 40.0 4.51e-01 79.3% 67.7%
1wgoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 37.0 4.06e-01 76.0% 58.6%
1dr9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 38.0 4.20e-01 76.0% 68.4%
3s98A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 37.0 4.43e-01 80.2% 80.5%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 33.0 4.50e-01 99.2% 98.3%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 37.0 4.13e-01 91.7% 69.5%
4ofkB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 39.0 4.14e-01 76.0% 66.3%
2if7B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 32.0 3.73e-01 77.7% 63.2%
4jvuA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 38.0 3.97e-01 76.9% 61.8%
8d7eC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 33.0 3.92e-01 73.6% 70.2%
4p04A01 2.60.40.3100 Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain 0.64 37.0 3.94e-01 80.2% 64.2%
1w8oA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 36.0 3.89e-01 76.0% 64.7%
7sz8A02 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.63 34.0 3.79e-01 76.0% 65.3%
3mnmA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.63 38.0 3.94e-01 77.7% 64.3%
4depC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 35.0 3.79e-01 79.3% 64.7%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.62 39.0 3.92e-01 82.6% 62.5%
7cymA04 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.61 34.0 3.76e-01 79.3% 67.0%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.60 26.0 3.70e-01 71.1% 83.3%
3ubfA03 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.60 35.0 3.74e-01 79.3% 66.7%
2i44B00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.60 53.0 3.96e-01 99.2% 63.9%
1kyfA01 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.59 38.0 3.68e-01 79.3% 58.2%
3p3yA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 31.0 3.52e-01 76.0% 68.9%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.57 38.0 3.78e-01 96.7% 64.8%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 36.0 4.02e-01 74.4% 82.5%
7uzsX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 37.0 3.82e-01 91.7% 71.3%
1t0pB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 33.0 3.87e-01 100.0% 84.9%
3butA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 38.0 3.80e-01 76.0% 70.4%
1zxqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 33.0 3.82e-01 100.0% 85.9%
1lc0A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 43.0 4.01e-01 85.1% 87.1%
2rqlA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.53 39.0 4.37e-01 98.3% 98.9%
1bqsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 36.0 3.67e-01 76.9% 71.4%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 32.0 2.90e-01 81.0% 41.9%
2ddmB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 38.0 2.96e-01 76.0% 50.6%
3it8D01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.52 31.0 2.76e-01 100.0% 38.3%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.51 39.0 4.13e-01 100.0% 89.9%
4nzjA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 33.0 3.72e-01 100.0% 85.7%
2ywqA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.51 36.0 4.13e-01 100.0% 100.0%
3tqmA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.51 37.0 4.17e-01 95.0% 100.0%
8gsxA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 37.0 3.42e-01 75.2% 65.6%
3v3sA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.50 44.0 3.36e-01 94.2% 84.4%
4ewfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.50 44.0 3.37e-01 94.2% 83.6%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4336488 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.80 36.0 4.73e-01 95.0% 75.7%
5063417 11.1.1.236 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig 0.79 44.0 4.99e-01 76.9% 70.5%
4934545 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.79 39.0 4.15e-01 75.2% 52.7%
4040973 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.79 38.0 4.93e-01 96.7% 80.0%
5060060 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.77 42.0 4.72e-01 76.9% 68.4%
4646686 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.75 34.0 4.42e-01 94.2% 74.3%
4359254 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.74 34.0 4.31e-01 95.0% 70.7%
5038983 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.73 43.0 4.99e-01 81.0% 80.0%
3285156 11.1.1.457 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FixH 0.72 40.0 4.27e-01 79.3% 60.6%
3904531 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 40.0 4.34e-01 80.2% 65.0%
3936092 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.71 34.0 2.57e-01 94.2% 20.4%
3615107 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 41.0 4.31e-01 80.2% 62.7%
4157358 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.70 37.0 4.43e-01 100.0% 76.9%
4969573 11.1.1.75 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › He_PIG 0.70 35.0 4.79e-01 78.5% 96.7%
5022726 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.69 29.0 4.35e-01 81.8% 94.0%
3400623 284.1.3.13 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › PF30019 0.69 30.0 3.77e-01 87.6% 65.3%
5028966 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 37.0 4.08e-01 76.0% 65.3%
3886021 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 41.0 4.57e-01 81.8% 76.8%
3809302 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.67 35.0 4.12e-01 99.2% 71.8%
5070691 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 38.0 4.12e-01 76.0% 67.0%
3411225 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 40.0 4.31e-01 80.2% 69.5%
3965319 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.66 34.0 3.51e-01 98.3% 51.3%
3406796 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 38.0 4.18e-01 82.6% 69.0%
3918752 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 39.0 4.25e-01 79.3% 71.0%
3884372 11.1.1.711 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FN3_IL27B_N 0.66 39.0 4.29e-01 79.3% 72.0%
4026643 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 32.0 3.76e-01 94.2% 67.1%
3670595 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.64 34.0 3.79e-01 99.2% 64.2%
4990961 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 36.0 4.01e-01 76.0% 69.5%
3482241 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 38.0 4.21e-01 75.2% 73.7%
4980867 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 37.0 3.91e-01 77.7% 64.8%
3759551 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.63 38.0 3.42e-01 85.1% 42.9%
3869565 11.1.1.794 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LIFR_D4 0.63 39.0 4.16e-01 77.7% 71.4%
3464233 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.62 36.0 4.27e-01 99.2% 85.0%
4498611 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.61 36.0 3.14e-01 72.7% 36.8%
3217851 302.2.1.0 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit 0.61 42.0 4.31e-01 73.6% 73.9%
3792470 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.60 45.0 4.53e-01 96.7% 76.0%
3939447 11.1.1.187 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EFF-AFF 0.60 38.0 3.66e-01 80.2% 55.6%
5023510 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.59 43.0 3.14e-01 76.9% 38.8%
3481284 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 43.0 4.14e-01 80.2% 67.4%
4991311 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 46.0 4.66e-01 97.5% 84.2%
3954034 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.58 36.0 3.04e-01 100.0% 38.5%
4016508 2485.2.1.0 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain 0.57 46.0 4.90e-01 96.7% 98.1%
5073160 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.57 40.0 3.90e-01 100.0% 66.9%
5035959 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 40.0 4.00e-01 81.0% 72.0%
4325844 5085.1.1.2 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › PF27489, PF29296 0.54 38.0 2.59e-01 71.9% 93.6%
5076771 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.54 36.0 3.79e-01 95.9% 74.5%
4120507 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.54 27.0 3.02e-01 80.2% 57.9%
3526254 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 35.0 3.67e-01 76.0% 71.8%
3987123 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.54 38.0 4.28e-01 94.2% 98.9%
3513352 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.53 44.0 4.51e-01 91.7% 92.2%
3249335 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.53 33.0 3.47e-01 100.0% 70.5%
3838659 5085.1.1.0 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.52 42.0 2.87e-01 83.5% 98.3%
3892200 71.2.1.4 beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.51 44.0 3.56e-01 94.2% 88.1%
3559952 71.2.1.4 beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.51 43.0 3.50e-01 93.4% 87.1%
1007198 224.1.1.1 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF 0.51 44.0 4.05e-01 97.5% 83.6%
4528588 7520.1.1.1 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA 0.51 46.0 4.16e-01 100.0% 87.2%