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OP172807.1__WAX16110.1__EH802P2_00004__00004
Bact-VirOP172807.1__WAX16110.1__EH802P2_00004__00004
Identity
- Accession:
- OP172807 ↗
- Kingdom:
- phage
Quality
60.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-136
D2
high
residues 179-241
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 80.0 | 7.32e-01 | 100.0% | 73.8% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 77.0 | 7.69e-01 | 100.0% | 90.8% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.87 | 76.0 | 5.68e-01 | 100.0% | 41.5% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 75.0 | 7.47e-01 | 95.2% | 92.2% |
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 74.0 | 7.53e-01 | 95.2% | 100.0% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 68.0 | 6.81e-01 | 98.4% | 96.8% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.76 | 52.0 | 4.47e-01 | 81.0% | 46.4% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.74 | 64.0 | 5.64e-01 | 100.0% | 66.0% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.68 | 51.0 | 4.82e-01 | 95.2% | 66.7% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 54.0 | 4.61e-01 | 88.9% | 76.9% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.67 | 58.0 | 4.64e-01 | 100.0% | 69.4% |
| 4cc9B00 | 1.20.5.4730 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 44.0 | 3.76e-01 | 71.4% | 43.9% |
| 2yksA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.64 | 47.0 | 3.78e-01 | 100.0% | 41.9% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 49.0 | 4.86e-01 | 98.4% | 77.6% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 51.0 | 4.62e-01 | 100.0% | 65.5% |
| 2yu1A02 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 45.0 | 3.83e-01 | 100.0% | 46.2% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 41.0 | 3.99e-01 | 92.1% | 60.3% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 47.0 | 4.70e-01 | 92.1% | 78.8% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 50.0 | 5.10e-01 | 96.8% | 93.3% |
| 2f1kC02 | 1.10.3660.10 | Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain | 0.59 | 46.0 | 3.81e-01 | 84.1% | 71.7% |
| 3tacB01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.57 | 49.0 | 3.94e-01 | 96.8% | 59.8% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.57 | 47.0 | 4.45e-01 | 100.0% | 75.0% |
| 1rfyB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.57 | 47.0 | 4.18e-01 | 92.1% | 63.6% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 48.0 | 4.17e-01 | 96.8% | 61.7% |
| 3q2eA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.56 | 46.0 | 3.96e-01 | 95.2% | 99.1% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.56 | 47.0 | 4.66e-01 | 96.8% | 88.1% |
| 1m5yA01 | 1.10.4030.10 | Mainly Alpha › Orthogonal Bundle › Triger factor/SurA peptide-binding fold › Porin chaperone SurA, peptide-binding domain | 0.56 | 45.0 | 3.62e-01 | 88.9% | 58.1% |
| 1kblA05 | 1.20.80.30 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.56 | 44.0 | 3.92e-01 | 96.8% | 60.7% |
| 2bnkA00 | 1.10.8.600 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Phage phi29 replication organiser protein p16.7-like | 0.55 | 40.0 | 4.01e-01 | 76.2% | 92.2% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.55 | 47.0 | 4.33e-01 | 98.4% | 73.2% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.54 | 47.0 | 4.52e-01 | 100.0% | 95.9% |
| 1cw1A00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.53 | 39.0 | 2.35e-01 | 98.4% | 11.8% |
| 3vkgA09 | 1.20.920.30 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.52 | 43.0 | 3.39e-01 | 95.2% | 67.4% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 44.0 | 3.70e-01 | 95.2% | 55.6% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.52 | 46.0 | 3.84e-01 | 100.0% | 60.0% |
| 1gvnA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 45.0 | 4.09e-01 | 100.0% | 75.9% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.51 | 44.0 | 4.08e-01 | 95.2% | 83.5% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4175748 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.92 | 81.0 | 7.40e-01 | 100.0% | 73.8% |
| 4202221 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.91 | 77.0 | 7.48e-01 | 96.8% | 82.4% |
| 3363617 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.89 | 84.0 | 7.48e-01 | 100.0% | 74.1% |
| 4238054 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.89 | 75.0 | 4.88e-01 | 100.0% | 23.3% |
| 3663639 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.89 | 84.0 | 5.90e-01 | 100.0% | 37.3% |
| 4563221 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.87 | 79.0 | 6.73e-01 | 100.0% | 64.2% |
| 4570076 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.87 | 79.0 | 4.96e-01 | 100.0% | 21.8% |
| 3972282 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 76.0 | 6.98e-01 | 96.8% | 74.7% |
| 4585396 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.87 | 78.0 | 5.66e-01 | 100.0% | 38.1% |
| 3721414 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.86 | 58.0 | 6.79e-01 | 71.4% | 97.8% |
| 3959876 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.86 | 78.0 | 6.55e-01 | 100.0% | 62.0% |
| 4524644 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.85 | 79.0 | 5.35e-01 | 100.0% | 30.7% |
| 3974736 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 72.0 | 6.48e-01 | 100.0% | 68.2% |
| 4213931 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.85 | 76.0 | 6.78e-01 | 100.0% | 71.8% |
| 3193121 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 58.0 | 6.22e-01 | 74.6% | 81.8% |
| 4618625 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 70.0 | 5.85e-01 | 100.0% | 57.1% |
| 3578154 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 73.0 | 6.42e-01 | 100.0% | 71.1% |
| 3974118 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 66.0 | 5.86e-01 | 95.2% | 63.3% |
| 5000586 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 62.0 | 6.06e-01 | 96.8% | 82.9% |
| 3684804 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.71 | 56.0 | 5.96e-01 | 87.3% | 98.2% |
| 1566346 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 50.0 | 4.81e-01 | 96.8% | 69.0% |
| 3997160 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.66 | 44.0 | 3.78e-01 | 100.0% | 44.0% |
| 3493493 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.65 | 56.0 | 4.65e-01 | 95.2% | 58.2% |
| 4990602 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.65 | 58.0 | 4.12e-01 | 100.0% | 61.6% |
| 3285340 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.64 | 49.0 | 3.71e-01 | 85.7% | 45.6% |
| 3236866 | 1135.1.1.3 ↗ | a+b complex topology › Immune Mapped Protein 2 (IMP2) › Immune Mapped Protein 2 (IMP2) › Immune Mapped Protein 2 (IMP2) › CytochromB561_N | 0.63 | 55.0 | 4.78e-01 | 96.8% | 69.5% |
| 4664976 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 52.0 | 3.47e-01 | 90.5% | 44.9% |
| 4263013 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.63 | 53.0 | 3.51e-01 | 95.2% | 41.1% |
| 3231116 | 5059.1.1.17 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TMEM234 | 0.63 | 49.0 | 4.25e-01 | 84.1% | 94.7% |
| 3377936 | 3922.1.1.173 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF3493 | 0.63 | 50.0 | 4.53e-01 | 95.2% | 63.5% |
| 3324409 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.61 | 44.0 | 4.62e-01 | 76.2% | 89.1% |
| 3980428 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.60 | 48.0 | 4.56e-01 | 96.8% | 73.3% |
| 3726318 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.59 | 51.0 | 3.52e-01 | 100.0% | 91.3% |
| 4115372 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.57 | 51.0 | 4.15e-01 | 96.8% | 80.9% |
| 3840064 | 192.24.1.0 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain | 0.57 | 48.0 | 4.16e-01 | 92.1% | 64.2% |
| 3588172 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.57 | 51.0 | 3.84e-01 | 100.0% | 94.0% |
| 4988222 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.56 | 52.0 | 4.75e-01 | 100.0% | 81.2% |
| 3702706 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.56 | 48.0 | 4.49e-01 | 95.2% | 76.2% |
| 3928911 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.56 | 47.0 | 4.60e-01 | 92.1% | 87.1% |
| 4557944 | 150.1.1.193 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ribophorin_II_C | 0.56 | 49.0 | 4.32e-01 | 100.0% | 69.5% |
| 3163932 | 601.4.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › PilJ | 0.56 | 49.0 | 4.14e-01 | 98.4% | 100.0% |
| 4942062 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.55 | 48.0 | 4.37e-01 | 96.8% | 72.9% |
| 5083369 | 604.4.1.0 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP | 0.55 | 42.0 | 3.76e-01 | 85.7% | 84.9% |
| 3233589 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.55 | 47.0 | 4.48e-01 | 95.2% | 81.3% |
| 3377749 | 3843.1.1.15 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › ETR1_N | 0.55 | 48.0 | 4.14e-01 | 98.4% | 71.0% |
| 3781752 | 192.15.1.46 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Ribophorin_II_C | 0.54 | 47.0 | 3.90e-01 | 100.0% | 59.1% |