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OP172807.1__WAX16200.1__EH802P2_00095__00094

Bact-Vir

OP172807.1__WAX16200.1__EH802P2_00095__00094

Identity

Accession:
OP172807 ↗
Kingdom:
phage

Quality

85.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Enterococcus_phage_EH802P2

TaxID: 2968651

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 51-109
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1f05A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 48.0 3.06e-01 91.5% 86.6%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 48.0 4.96e-01 93.2% 98.2%
4kxfB02 1.10.1900.50 Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › 0.58 38.0 3.92e-01 72.9% 70.2%
4od8D00 6.10.140.1880 Special › Helix non-globular › Helix Hairpins › 0.52 38.0 3.99e-01 93.2% 92.2%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 38.0 3.23e-01 79.7% 84.3%
5f42A02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.50 40.0 3.67e-01 93.2% 81.7%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3593958 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 51.0 5.10e-01 94.9% 81.7%
5031685 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.66 54.0 5.13e-01 91.5% 77.1%
3342568 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.60 42.0 4.27e-01 91.5% 75.0%
3869754 109.16.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › TROVE domain-like › TROVE domain-like › TROVE 0.59 50.0 3.09e-01 98.3% 97.5%
3679318 109.4.1.1992 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, DYW_deaminase, E_motif 0.57 44.0 2.55e-01 86.4% 17.5%
D2 high residues 115-170
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nutB04 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.58 48.0 3.27e-01 100.0% 58.9%
1d7qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 38.0 2.98e-01 75.0% 64.3%
4phtY02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.53 42.0 4.12e-01 100.0% 80.6%
2jz6A01 2.30.170.40 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 0.53 40.0 4.21e-01 100.0% 94.0%
5yvxA00 3.30.40.100 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.52 40.0 4.02e-01 89.3% 100.0%
3ce2A02 1.10.287.830 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › putative peptidase helix hairpin domain like 0.52 38.0 4.01e-01 92.9% 95.7%
2x98A01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.51 39.0 2.57e-01 96.4% 44.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3191164 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 46.0 4.26e-01 100.0% 62.9%
3424086 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.59 44.0 3.21e-01 83.9% 53.1%
3255283 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.51 42.0 2.53e-01 91.1% 33.7%
4018760 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.51 44.0 4.07e-01 100.0% 80.0%