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OP172808.1__WAX16249.1__EL753P1_00027__00027
Bact-VirOP172808.1__WAX16249.1__EL753P1_00027__00027
Identity
- Accession:
- OP172808 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Cluster
View cluster (19 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-38_52-139
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20458.4 best | DUF6711 | 28.6 | 2.20e-06 | 84.1% | 46.7% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.71 | 40.0 | 4.38e-01 | 95.3% | 67.0% |
| 6ya6A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 41.0 | 4.28e-01 | 96.3% | 70.4% |
| 3rgfA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 40.0 | 4.18e-01 | 94.4% | 69.8% |
| 2x7gA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 39.0 | 4.26e-01 | 97.2% | 76.1% |
| 3tvjB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 42.0 | 4.27e-01 | 100.0% | 72.0% |
| 3zxoA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.60 | 43.0 | 4.12e-01 | 100.0% | 64.0% |
| 1cqxA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 38.0 | 3.83e-01 | 99.1% | 64.9% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.58 | 38.0 | 4.00e-01 | 93.5% | 75.5% |
| 5gj7A02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.57 | 43.0 | 4.49e-01 | 100.0% | 90.4% |
| 2g1dA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 38.0 | 3.91e-01 | 97.2% | 73.5% |
| 2aiqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 39.0 | 3.89e-01 | 100.0% | 68.1% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.56 | 50.0 | 4.06e-01 | 100.0% | 73.3% |
| 3pfeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 40.0 | 3.83e-01 | 76.6% | 73.1% |
| 1e62A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 42.0 | 4.00e-01 | 100.0% | 68.0% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 36.0 | 3.60e-01 | 75.7% | 64.2% |
| 6lgqC01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 38.0 | 3.59e-01 | 98.1% | 59.5% |
| 2crvA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 37.0 | 3.97e-01 | 100.0% | 81.7% |
| 1orfA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 38.0 | 3.86e-01 | 100.0% | 74.3% |
| 3tu3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 32.0 | 3.14e-01 | 89.7% | 51.3% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 35.0 | 3.51e-01 | 100.0% | 63.1% |
| 2olgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 42.0 | 3.94e-01 | 100.0% | 72.1% |
| 3sl2A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 41.0 | 3.75e-01 | 100.0% | 63.4% |
| 2k0rA00 | 2.60.40.1250 | Mainly Beta › Sandwich › Immunoglobulin-like › Thiol:disulfide interchange protein DsbD, N-terminal domain | 0.51 | 34.0 | 3.27e-01 | 95.3% | 57.0% |
| 2ix5A02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.51 | 42.0 | 4.20e-01 | 100.0% | 89.7% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 39.0 | 3.92e-01 | 95.3% | 77.5% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4010403 | 310.3.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM | 0.69 | 46.0 | 4.92e-01 | 100.0% | 78.5% |
| 5004308 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 60.0 | 5.28e-01 | 100.0% | 75.5% |
| 136022 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 42.0 | 2.92e-01 | 97.2% | 20.9% |
| 3958221 | 304.55.1.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains | 0.65 | 41.0 | 3.67e-01 | 96.3% | 43.2% |
| 3678892 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.65 | 42.0 | 4.77e-01 | 94.4% | 87.5% |
| 5055367 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.64 | 43.0 | 4.58e-01 | 98.1% | 77.9% |
| 2595266 | 241.1.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN | 0.64 | 38.0 | 3.54e-01 | 95.3% | 46.7% |
| 4665957 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.64 | 40.0 | 4.08e-01 | 96.3% | 63.8% |
| 4257969 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 44.0 | 4.15e-01 | 97.2% | 62.0% |
| 3366066 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.60 | 38.0 | 2.75e-01 | 97.2% | 23.4% |
| 1954213 | 241.1.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN | 0.59 | 36.0 | 3.31e-01 | 97.2% | 44.1% |
| 4888780 | 304.124.1.5 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › T4-gp15_tss | 0.58 | 52.0 | 4.05e-01 | 99.1% | 75.6% |
| 3714156 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 34.0 | 3.72e-01 | 92.5% | 71.8% |
| 3278894 | 304.8.1.61 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GDH_ACT1 | 0.57 | 36.0 | 3.69e-01 | 93.5% | 64.8% |
| 2088135 | 4052.1.1.1 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA_dh_M | 0.57 | 43.0 | 4.24e-01 | 99.1% | 75.9% |
| 3519115 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 37.0 | 2.62e-01 | 96.3% | 21.5% |
| 4027705 | 1.1.7.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Aquarius_N_2nd | 0.57 | 51.0 | 4.61e-01 | 99.1% | 78.6% |
| 3591908 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 51.0 | 4.28e-01 | 100.0% | 77.2% |
| 3656626 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.56 | 37.0 | 2.62e-01 | 96.3% | 21.2% |
| 3712451 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 33.0 | 3.20e-01 | 96.3% | 50.4% |
| 3967781 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.55 | 47.0 | 4.10e-01 | 100.0% | 61.9% |
| 3264067 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.54 | 36.0 | 2.58e-01 | 96.3% | 22.5% |
| 3959629 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.53 | 39.0 | 3.99e-01 | 100.0% | 79.0% |
| 3960152 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.52 | 34.0 | 3.18e-01 | 96.3% | 51.9% |
| 3781969 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.51 | 46.0 | 4.16e-01 | 99.1% | 75.9% |
| 3871410 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.50 | 41.0 | 3.01e-01 | 92.5% | 59.4% |