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OP172808.1__WAX16261.1__EL753P1_00039__00039
Bact-VirOP172808.1__WAX16261.1__EL753P1_00039__00039
Identity
- Accession:
- OP172808 ↗
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-68
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kcaA03 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.64 | 48.0 | 4.29e-01 | 89.7% | 56.7% |
| 2b5uA03 | 3.10.380.10 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain | 0.63 | 43.0 | 3.80e-01 | 86.8% | 49.0% |
| 4kc7A02 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 48.0 | 4.31e-01 | 86.8% | 57.6% |
| 2uvaG07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.61 | 48.0 | 3.84e-01 | 86.8% | 42.6% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 45.0 | 3.41e-01 | 94.1% | 33.1% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 49.0 | 4.48e-01 | 88.2% | 93.2% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.59 | 43.0 | 3.82e-01 | 85.3% | 52.0% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.58 | 37.0 | 3.92e-01 | 72.1% | 73.3% |
| 1jhnA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 48.0 | 3.39e-01 | 94.1% | 69.0% |
| 3uaqB02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 43.0 | 3.32e-01 | 80.9% | 57.7% |
| 1w94A00 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.58 | 46.0 | 3.62e-01 | 89.7% | 79.4% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.58 | 48.0 | 3.72e-01 | 92.6% | 45.5% |
| 1vprA03 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 45.0 | 3.50e-01 | 86.8% | 42.0% |
| 8f5pE01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 51.0 | 3.17e-01 | 100.0% | 47.3% |
| 4efzB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 40.0 | 2.67e-01 | 73.5% | 92.7% |
| 2zgoA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 44.0 | 3.36e-01 | 86.8% | 49.1% |
| 2f2hA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 43.0 | 3.61e-01 | 82.4% | 67.9% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 43.0 | 3.56e-01 | 86.8% | 54.3% |
| 1xksA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 46.0 | 2.95e-01 | 97.1% | 39.8% |
| 1f20A02 | 1.20.990.10 | Mainly Alpha › Up-down Bundle › NADPH-cytochrome p450 Reductase; Chain A, domain 3 › NADPH-cytochrome p450 Reductase; Chain A, domain 3 | 0.55 | 37.0 | 2.84e-01 | 70.6% | 46.5% |
| 2r0hA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 44.0 | 3.38e-01 | 89.7% | 51.9% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 41.0 | 3.25e-01 | 89.7% | 36.3% |
| 1vkcA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 41.0 | 3.24e-01 | 80.9% | 64.0% |
| 6x05A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 46.0 | 2.92e-01 | 97.1% | 45.9% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 42.0 | 2.93e-01 | 89.7% | 41.5% |
| 4u1eI00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 44.0 | 2.93e-01 | 95.6% | 45.5% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.54 | 42.0 | 3.05e-01 | 85.3% | 99.0% |
| 4l8hB00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.54 | 42.0 | 3.53e-01 | 86.8% | 61.0% |
| 2owpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 42.0 | 3.46e-01 | 86.8% | 82.9% |
| 4e0aA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 40.0 | 3.12e-01 | 80.9% | 61.5% |
| 2yfsA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 43.0 | 2.71e-01 | 97.1% | 51.7% |
| 3esiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 39.0 | 3.31e-01 | 82.4% | 84.7% |
| 1z94B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 43.0 | 3.44e-01 | 92.6% | 53.1% |
| 3gxwC00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 36.0 | 3.20e-01 | 73.5% | 52.0% |
| 2gqrA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 39.0 | 3.42e-01 | 80.9% | 80.0% |
| 2hv2A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 37.0 | 3.43e-01 | 80.9% | 84.2% |
| 3ub1A01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 3.09e-01 | 82.4% | 52.9% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 3.66e-01 | 76.5% | 78.3% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 35.0 | 3.36e-01 | 86.8% | 62.5% |
| 1t3yA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.51 | 35.0 | 2.89e-01 | 73.5% | 82.4% |
| 3qwxX01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 38.0 | 3.26e-01 | 80.9% | 74.1% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3395786 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 52.0 | 3.28e-01 | 82.4% | 16.7% |
| 3247905 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.66 | 51.0 | 3.47e-01 | 82.4% | 36.4% |
| 3884681 | 292.2.1.10 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › C5orf34-like_N | 0.64 | 44.0 | 3.95e-01 | 86.8% | 51.6% |
| 3559914 | 3735.1.1.0 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein | 0.64 | 51.0 | 2.77e-01 | 89.7% | 28.8% |
| 3843785 | 292.2.1.10 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › C5orf34-like_N | 0.64 | 44.0 | 3.90e-01 | 86.8% | 50.0% |
| 3726880 | 4252.1.1.12 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 | 0.63 | 54.0 | 4.38e-01 | 92.6% | 88.8% |
| 4099351 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.63 | 54.0 | 3.38e-01 | 98.5% | 55.0% |
| 3596095 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.63 | 44.0 | 2.81e-01 | 82.4% | 14.1% |
| 3189690 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.62 | 53.0 | 3.33e-01 | 94.1% | 50.1% |
| 4028672 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.62 | 51.0 | 3.53e-01 | 89.7% | 70.2% |
| 3615699 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.61 | 46.0 | 3.35e-01 | 82.4% | 100.0% |
| 4026237 | 59.1.1.8 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › TFIIF_beta_N | 0.61 | 45.0 | 4.20e-01 | 82.4% | 73.3% |
| 3579622 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.60 | 43.0 | 3.72e-01 | 86.8% | 47.3% |
| 5042979 | 241.1.1.30 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 | 0.59 | 47.0 | 3.65e-01 | 86.8% | 92.7% |
| 3869953 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 50.0 | 3.20e-01 | 100.0% | 40.5% |
| 3498860 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 52.0 | 3.33e-01 | 98.5% | 83.3% |
| 3614143 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.58 | 46.0 | 3.85e-01 | 88.2% | 57.3% |
| 5017293 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.58 | 47.0 | 3.60e-01 | 89.7% | 86.6% |
| 3599605 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.58 | 49.0 | 3.41e-01 | 98.5% | 53.7% |
| 3923839 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 40.0 | 4.03e-01 | 72.1% | 75.7% |
| 3265841 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.57 | 44.0 | 3.87e-01 | 89.7% | 56.0% |
| 3944564 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.57 | 49.0 | 2.79e-01 | 97.1% | 69.3% |
| 3619225 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.57 | 46.0 | 3.34e-01 | 85.3% | 60.6% |
| 3498392 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 42.0 | 3.48e-01 | 79.4% | 94.1% |
| 3569201 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.56 | 47.0 | 3.01e-01 | 98.5% | 36.2% |
| 3871207 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.56 | 48.0 | 2.97e-01 | 98.5% | 38.4% |
| 4825040 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.56 | 41.0 | 3.25e-01 | 82.4% | 37.3% |
| 3618645 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.56 | 45.0 | 3.46e-01 | 86.8% | 77.3% |
| 2038 | 4178.1.1.4 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › PF29281 | 0.55 | 43.0 | 3.62e-01 | 82.4% | 68.5% |
| 3636832 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.55 | 45.0 | 3.41e-01 | 92.6% | 80.0% |
| 4159356 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.55 | 40.0 | 2.52e-01 | 79.4% | 36.5% |
| 3474593 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.54 | 42.0 | 3.26e-01 | 85.3% | 49.4% |
| 4261079 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.54 | 42.0 | 3.31e-01 | 85.3% | 83.3% |
| 3275758 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.54 | 47.0 | 2.85e-01 | 100.0% | 25.4% |
| 3587406 | 331.1.1.2 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › Rep_trans | 0.54 | 42.0 | 3.14e-01 | 83.8% | 34.9% |
| 3612730 | 10.15.1.1 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 | 0.53 | 42.0 | 3.51e-01 | 86.8% | 86.7% |
| 4020575 | 12.1.1.26 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_79C | 0.53 | 36.0 | 3.19e-01 | 73.5% | 100.0% |
| 4003791 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.52 | 44.0 | 3.36e-01 | 100.0% | 58.9% |
| 3660020 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 41.0 | 4.05e-01 | 91.2% | 80.8% |
| 3664574 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.52 | 39.0 | 2.59e-01 | 82.4% | 26.9% |
| 5013748 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 42.0 | 3.12e-01 | 95.6% | 75.1% |
| 3681742 | 220.1.1.182 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › RDR6_2nd | 0.51 | 41.0 | 3.13e-01 | 89.7% | 72.7% |
| 3583042 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.50 | 36.0 | 2.78e-01 | 76.5% | 35.7% |
D2
medium
residues 69-118
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iylU02 | 1.10.287.1520 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.80 | 70.0 | 6.87e-01 | 96.0% | 94.3% |