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OP172808.1__WAX16279.1__EL753P1_00057__00057
Bact-VirOP172808.1__WAX16279.1__EL753P1_00057__00057
Identity
- Accession:
- OP172808 ↗
- Kingdom:
- phage
Quality
89.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-100
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4l9cA00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.68 | 53.0 | 4.37e-01 | 83.3% | 52.7% |
| 2lpuA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.66 | 46.0 | 3.81e-01 | 72.6% | 41.2% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.66 | 45.0 | 3.56e-01 | 71.4% | 63.3% |
| 3ec9A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 44.0 | 3.88e-01 | 73.8% | 94.6% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 42.0 | 3.45e-01 | 72.6% | 42.0% |
| 6htnA01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.60 | 48.0 | 4.07e-01 | 85.7% | 66.4% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 40.0 | 3.32e-01 | 70.2% | 50.6% |
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.59 | 36.0 | 4.27e-01 | 90.5% | 86.7% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 48.0 | 3.35e-01 | 90.5% | 79.9% |
| 4id2A00 | 2.40.128.510 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 | 0.58 | 45.0 | 3.89e-01 | 84.5% | 89.0% |
| 3ub1D02 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 47.0 | 4.27e-01 | 89.3% | 93.0% |
| 4n4bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 50.0 | 3.43e-01 | 100.0% | 76.8% |
| 4q8gA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 48.0 | 3.17e-01 | 94.0% | 89.5% |
| 1s6lA02 | 3.15.10.60 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Alkylmercury lyase | 0.55 | 35.0 | 3.03e-01 | 89.3% | 41.1% |
| 1mo7A00 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.54 | 42.0 | 3.16e-01 | 83.3% | 90.6% |
| 2l4vA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 3.89e-01 | 92.9% | 95.6% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.54 | 39.0 | 3.67e-01 | 76.2% | 91.2% |
| 4jocA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.53 | 46.0 | 3.12e-01 | 100.0% | 93.5% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.53 | 41.0 | 3.19e-01 | 86.9% | 85.4% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 45.0 | 3.64e-01 | 97.6% | 68.5% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.51 | 38.0 | 3.94e-01 | 79.8% | 97.5% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 35.0 | 3.51e-01 | 70.2% | 83.1% |
| 3l4gC04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 45.0 | 3.12e-01 | 98.8% | 37.6% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3624657 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.68 | 49.0 | 4.54e-01 | 77.4% | 67.3% |
| 3258651 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.67 | 48.0 | 3.04e-01 | 76.2% | 64.9% |
| 3827726 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.66 | 56.0 | 3.84e-01 | 92.9% | 83.1% |
| 4026006 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.65 | 44.0 | 4.57e-01 | 70.2% | 93.8% |
| 3969556 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.64 | 44.0 | 3.51e-01 | 71.4% | 64.0% |
| 3378755 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.64 | 46.0 | 4.09e-01 | 76.2% | 62.4% |
| 3194658 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.64 | 50.0 | 3.18e-01 | 85.7% | 48.1% |
| 1678533 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.63 | 44.0 | 4.73e-01 | 72.6% | 100.0% |
| 3397645 | 5.1.4.85 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NOL11_N | 0.62 | 50.0 | 3.29e-01 | 85.7% | 53.8% |
| 4030445 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 48.0 | 3.10e-01 | 84.5% | 33.7% |
| 5036065 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 44.0 | 4.68e-01 | 77.4% | 98.7% |
| 4330244 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.61 | 41.0 | 3.84e-01 | 70.2% | 65.1% |
| 4355722 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.60 | 47.0 | 4.54e-01 | 84.5% | 97.9% |
| 3965583 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.60 | 41.0 | 3.53e-01 | 71.4% | 48.6% |
| 3375375 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.60 | 48.0 | 3.27e-01 | 88.1% | 31.1% |
| 3798522 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.59 | 37.0 | 3.27e-01 | 88.1% | 44.2% |
| 5038083 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.58 | 51.0 | 4.46e-01 | 95.2% | 66.9% |
| 3286732 | 243.1.1.72 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3071 | 0.58 | 44.0 | 4.23e-01 | 83.3% | 92.0% |
| 5018521 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 39.0 | 4.05e-01 | 71.4% | 83.7% |
| 3892746 | 5.1.4.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP | 0.58 | 51.0 | 3.35e-01 | 100.0% | 88.5% |
| 3899321 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 51.0 | 3.41e-01 | 100.0% | 87.6% |
| 4001109 | 5.1.4.55 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ELYS-bb | 0.56 | 49.0 | 3.05e-01 | 98.8% | 76.8% |
| 4953412 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.56 | 47.0 | 4.09e-01 | 100.0% | 60.8% |
| 5021623 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.56 | 45.0 | 2.98e-01 | 90.5% | 28.7% |
| 3169357 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.56 | 47.0 | 4.33e-01 | 97.6% | 71.8% |
| 5018 | 4187.1.1.1 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › MerB | 0.55 | 35.0 | 4.02e-01 | 89.3% | 91.4% |
| 4346250 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.55 | 39.0 | 3.34e-01 | 75.0% | 62.9% |
| 5041343 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 42.0 | 4.46e-01 | 86.9% | 100.0% |
| 3375457 | 4.1.1.159 ↗ | beta barrels › SH3 › SH3 › SH3 › Saf4_Yju2 | 0.53 | 42.0 | 4.43e-01 | 84.5% | 97.3% |
| 4967370 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.53 | 38.0 | 3.75e-01 | 76.2% | 85.6% |
| 3632911 | 243.3.1.49 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Saf4_Yju2 | 0.53 | 42.0 | 4.24e-01 | 85.7% | 90.6% |
| 4117472 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.52 | 45.0 | 3.72e-01 | 98.8% | 71.2% |
| 4015390 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.52 | 39.0 | 3.63e-01 | 82.1% | 83.6% |
| 3282185 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.52 | 38.0 | 3.48e-01 | 81.0% | 83.3% |
| 144571 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.52 | 44.0 | 3.60e-01 | 97.6% | 67.3% |
| 3500048 | 206.1.1.17 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo | 0.51 | 44.0 | 3.05e-01 | 100.0% | 32.7% |
| 3948020 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.51 | 43.0 | 3.93e-01 | 92.9% | 90.0% |
| 2644388 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.51 | 40.0 | 3.47e-01 | 85.7% | 86.9% |