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OP172811.1__WAX16509.1__LC76P1_00072__00072

Bact-Vir

OP172811.1__WAX16509.1__LC76P1_00072__00072

Identity

Accession:
OP172811 ↗
Kingdom:
phage

Quality

88.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lysinibacillus_phage_LC76P1

TaxID: 2968682

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-132
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 32.0 5.07e-01 93.8% 100.0%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 33.0 4.67e-01 97.7% 90.5%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.71 29.0 4.47e-01 96.2% 96.0%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.68 28.0 4.33e-01 93.8% 98.0%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 37.0 4.56e-01 100.0% 83.3%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 31.0 4.49e-01 96.9% 98.3%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 28.0 4.29e-01 93.1% 100.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 30.0 3.93e-01 98.5% 76.7%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 27.0 4.26e-01 91.5% 100.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 27.0 4.14e-01 92.3% 100.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.64 24.0 3.88e-01 83.8% 95.7%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.63 25.0 3.85e-01 90.8% 90.4%
3frnA03 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.61 26.0 3.97e-01 83.8% 100.0%
1ycyA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 31.0 4.21e-01 100.0% 100.0%
2b5uA03 3.10.380.10 Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain 0.60 35.0 3.91e-01 90.0% 74.5%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.60 27.0 3.91e-01 74.6% 96.5%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.59 25.0 3.69e-01 91.5% 92.6%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 27.0 3.36e-01 91.5% 74.7%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 30.0 3.93e-01 84.6% 100.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 25.0 3.58e-01 90.8% 96.6%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 26.0 3.56e-01 91.5% 92.2%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 27.0 3.59e-01 80.8% 92.9%
2vifA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 34.0 3.48e-01 88.5% 69.8%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4990212 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 32.0 4.94e-01 93.8% 90.9%
5013892 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 34.0 5.03e-01 96.9% 98.2%
4997767 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 28.0 4.71e-01 89.2% 100.0%
4992872 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 33.0 4.99e-01 96.9% 98.2%
4994957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 32.0 4.73e-01 93.8% 94.5%
4579331 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 33.0 4.63e-01 100.0% 87.3%
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 29.0 4.38e-01 94.6% 87.3%
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 32.0 4.75e-01 96.9% 96.4%
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 30.0 4.52e-01 94.6% 90.9%
5058671 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 30.0 4.54e-01 96.9% 92.7%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.72 32.0 4.44e-01 100.0% 88.3%
3278801 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.71 32.0 4.42e-01 100.0% 84.6%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 31.0 4.52e-01 96.9% 94.5%
4662947 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.71 32.0 4.39e-01 100.0% 84.6%
3964846 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.71 32.0 3.95e-01 96.9% 65.9%
5025079 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 32.0 4.61e-01 96.9% 100.0%
4116921 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.69 32.0 4.47e-01 100.0% 93.3%
4967397 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 34.0 4.61e-01 97.7% 93.8%
4975150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 32.0 4.43e-01 100.0% 93.3%
5040416 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 29.0 4.38e-01 93.8% 100.0%
3877485 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 31.0 3.79e-01 100.0% 65.9%
4947995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 30.0 4.29e-01 96.9% 94.5%
3302818 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.67 29.0 4.29e-01 95.4% 96.4%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 30.0 3.65e-01 98.5% 64.7%
3398093 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.66 31.0 4.43e-01 100.0% 96.7%
3218198 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 29.0 4.33e-01 97.7% 98.2%
5036616 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 33.0 4.33e-01 97.7% 88.6%
4026678 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 33.0 4.38e-01 100.0% 90.0%
5066141 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 31.0 4.24e-01 96.9% 89.2%
4032729 4.1.1.168 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2187 0.64 30.0 4.36e-01 96.9% 100.0%
4015071 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 34.0 4.40e-01 100.0% 94.3%
4142364 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 32.0 4.29e-01 100.0% 93.8%
4980648 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 33.0 4.35e-01 100.0% 92.9%
5060760 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 32.0 4.37e-01 100.0% 98.5%
4011604 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 33.0 4.23e-01 100.0% 92.0%
5042544 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 29.0 3.85e-01 96.9% 87.7%
4971345 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 38.0 4.28e-01 85.4% 83.0%
5018124 9.2.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin 0.59 36.0 4.35e-01 100.0% 92.9%
3604264 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 36.0 4.12e-01 100.0% 85.0%
5052949 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 38.0 3.94e-01 87.7% 72.0%
3594587 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 39.0 2.74e-01 70.8% 34.3%
4253589 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.56 40.0 4.02e-01 87.7% 73.1%
5048098 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 38.0 3.93e-01 87.7% 72.8%
5065384 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.55 38.0 3.99e-01 87.7% 76.5%
3482646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 26.0 2.24e-01 92.3% 30.0%
4962256 101.1.2.937 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25943 0.50 36.0 3.86e-01 98.5% 87.3%