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OP172812.1__WAX16713.1__LG75P1_00032__00032
Bact-VirOP172812.1__WAX16713.1__LG75P1_00032__00032
Identity
- Accession:
- OP172812 ↗
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-127
Domain cluster:
rep: MN988551.1__QIG76012.1__EVC23_013__00013__D17-123
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cshA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.67 | 61.0 | 5.30e-01 | 100.0% | 66.5% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.65 | 58.0 | 4.94e-01 | 100.0% | 91.0% |
| 6ijfC01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.64 | 45.0 | 4.90e-01 | 90.3% | 89.2% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.64 | 46.0 | 5.01e-01 | 94.7% | 92.3% |
| 2as9B01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 34.0 | 3.63e-01 | 92.0% | 68.3% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.55 | 33.0 | 4.00e-01 | 72.6% | 100.0% |
| 3h96C00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 40.0 | 3.80e-01 | 93.8% | 63.8% |
| 7oc3A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 38.0 | 4.14e-01 | 99.1% | 95.7% |
| 1hlcA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 36.0 | 3.43e-01 | 71.7% | 99.2% |
| 2wkkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 36.0 | 3.30e-01 | 71.7% | 99.3% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.50 | 35.0 | 3.87e-01 | 73.5% | 96.7% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3592307 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.70 | 65.0 | 5.23e-01 | 100.0% | 70.0% |
| 4099186 | 219.1.1.21 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 | 0.66 | 60.0 | 5.01e-01 | 100.0% | 90.5% |
| 4676513 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.63 | 48.0 | 4.12e-01 | 100.0% | 50.6% |
| 3947087 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.63 | 41.0 | 3.64e-01 | 98.2% | 46.3% |
| 5030191 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 38.0 | 3.77e-01 | 100.0% | 58.3% |
| 3972374 | 219.1.1.96 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_i_TM | 0.63 | 40.0 | 3.92e-01 | 95.6% | 58.4% |
| 4960931 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 48.0 | 4.07e-01 | 93.8% | 55.6% |
| 5039871 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.55 | 37.0 | 2.87e-01 | 85.0% | 30.0% |
| 3890410 | 11.2.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF4550 | 0.54 | 37.0 | 3.35e-01 | 70.8% | 61.3% |
| 4332533 | 220.1.1.12 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 | 0.51 | 36.0 | 2.96e-01 | 73.5% | 58.6% |
| 4989205 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.50 | 44.0 | 3.77e-01 | 95.6% | 60.6% |
| 3546733 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.50 | 41.0 | 3.27e-01 | 91.2% | 76.8% |
D2
high
residues 155-209
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3x3mA01 | 3.30.2390.20 | Alpha Beta › 2-Layer Sandwich › TTHA1013/TTHA0281-like › Type VII secretion system EccB, repeat 1 domain | 0.73 | 59.0 | 5.16e-01 | 100.0% | 59.8% |
| 3x3nA04 | 2.40.50.910 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Type VII secretion system EccB, repeat 3 domain | 0.72 | 62.0 | 5.32e-01 | 100.0% | 60.7% |
| 7s5lA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.57 | 46.0 | 2.90e-01 | 100.0% | 95.1% |
| 2jwkA00 | 3.30.420.270 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.56 | 44.0 | 4.07e-01 | 89.1% | 68.9% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 38.0 | 3.21e-01 | 72.7% | 43.6% |
| 5umbA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 45.0 | 3.29e-01 | 100.0% | 96.7% |
| 3cngC02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.54 | 44.0 | 3.34e-01 | 94.5% | 70.6% |
| 2e9hA02 | 2.20.25.350 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 37.0 | 4.02e-01 | 83.6% | 93.2% |
| 4m7xA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 44.0 | 3.82e-01 | 100.0% | 89.0% |
| 5yycA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.52 | 35.0 | 2.46e-01 | 72.7% | 66.7% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 34.0 | 2.80e-01 | 72.7% | 35.8% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 39.0 | 3.62e-01 | 89.1% | 96.2% |
| 7vbnL01 | 3.30.160.190 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › atu1810 like domain | 0.51 | 39.0 | 3.39e-01 | 87.3% | 77.9% |
| 2pljA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.51 | 37.0 | 2.50e-01 | 76.4% | 60.7% |
| 1f2uA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 35.0 | 2.69e-01 | 74.5% | 30.9% |
| 3c5qA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.51 | 34.0 | 2.36e-01 | 72.7% | 84.7% |
| 7whgG02 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.50 | 39.0 | 3.35e-01 | 100.0% | 52.2% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4406214 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.81 | 50.0 | 4.20e-01 | 72.7% | 37.6% |
| 3950987 | 3708.1.1.1 ↗ | a+b three layers › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › T7SS_ESX1_EccB | 0.75 | 60.0 | 5.23e-01 | 100.0% | 57.6% |
| 4996608 | 2007.9.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 | 0.74 | 50.0 | 3.35e-01 | 74.5% | 19.5% |
| 4670245 | 3708.1.1.0 ↗ | a+b three layers › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains | 0.73 | 58.0 | 5.70e-01 | 100.0% | 81.7% |
| 3956194 | 3708.1.1.1 ↗ | a+b three layers › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › T7SS_ESX1_EccB | 0.72 | 62.0 | 5.41e-01 | 100.0% | 63.5% |
| 1031167 | 3708.1.1.1 ↗ | a+b three layers › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › T7SS_ESX1_EccB | 0.72 | 62.0 | 5.36e-01 | 100.0% | 62.1% |
| 3809821 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.65 | 48.0 | 2.96e-01 | 83.6% | 12.8% |
| 4945288 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 39.0 | 4.22e-01 | 72.7% | 76.7% |
| 3612883 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.62 | 41.0 | 4.48e-01 | 85.5% | 84.4% |
| 3275968 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.59 | 46.0 | 2.82e-01 | 87.3% | 19.5% |
| 5010990 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.59 | 44.0 | 4.10e-01 | 85.5% | 61.3% |
| 3233144 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.57 | 44.0 | 3.38e-01 | 90.9% | 57.9% |
| 1693005 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 45.0 | 4.05e-01 | 100.0% | 89.9% |
| 2860001 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.55 | 45.0 | 2.82e-01 | 100.0% | 93.9% |
| 5078978 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.55 | 38.0 | 2.46e-01 | 72.7% | 29.4% |
| 3627795 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 40.0 | 3.51e-01 | 80.0% | 68.2% |
| 3576434 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 44.0 | 3.69e-01 | 96.4% | 50.5% |
| 3212890 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.54 | 41.0 | 2.72e-01 | 87.3% | 26.0% |
| 3637395 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 43.0 | 3.32e-01 | 100.0% | 94.8% |
| 2855777 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.53 | 41.0 | 3.90e-01 | 89.1% | 71.2% |
| 3490042 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 40.0 | 3.38e-01 | 85.5% | 87.0% |
| 4971800 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.53 | 42.0 | 2.68e-01 | 92.7% | 15.9% |
| 3273157 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.53 | 40.0 | 2.46e-01 | 87.3% | 19.5% |
| 3212368 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.52 | 39.0 | 2.75e-01 | 87.3% | 22.8% |
| 3941275 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 31.0 | 2.59e-01 | 85.5% | 29.5% |
| 3754085 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.52 | 39.0 | 3.31e-01 | 87.3% | 72.1% |
| 3274996 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 43.0 | 2.59e-01 | 98.2% | 81.7% |