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OP172816.1__WAX16888.1__PD691P3_00003__00003
Bact-VirOP172816.1__WAX16888.1__PD691P3_00003__00003
Identity
- Accession:
- OP172816 ↗
- Kingdom:
- phage
Quality
81.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-57
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qqrA02 | 3.10.330.70 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.65 | 46.0 | 4.45e-01 | 75.0% | 100.0% |
| 3puaA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.65 | 56.0 | 3.47e-01 | 100.0% | 61.2% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.62 | 52.0 | 4.88e-01 | 100.0% | 90.2% |
| 3e59B02 | 3.30.60.140 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.61 | 42.0 | 4.53e-01 | 81.2% | 92.1% |
| 3fmaA00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.60 | 49.0 | 4.30e-01 | 100.0% | 93.8% |
| 3szpB02 | 3.40.190.290 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.58 | 40.0 | 2.82e-01 | 79.2% | 49.7% |
| 4lniJ01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.56 | 41.0 | 3.35e-01 | 83.3% | 70.2% |
| 4wz2C00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 39.0 | 3.47e-01 | 77.1% | 52.7% |
| 1zr6A02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 40.0 | 3.03e-01 | 100.0% | 29.8% |
| 2rijA02 | 3.30.60.70 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Trimeric LpxA-like enzymes | 0.53 | 36.0 | 3.73e-01 | 79.2% | 82.9% |
| 1wdjA00 | 3.90.1570.10 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › tt1808, chain A | 0.52 | 41.0 | 2.88e-01 | 95.8% | 61.8% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4950662 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.65 | 46.0 | 3.04e-01 | 77.1% | 23.8% |
| 4941559 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 46.0 | 3.74e-01 | 79.2% | 100.0% |
| 3711991 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 45.0 | 3.29e-01 | 77.1% | 33.8% |
| 3901437 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.62 | 45.0 | 4.20e-01 | 79.2% | 91.7% |
| 2888976 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 42.0 | 3.74e-01 | 79.2% | 74.0% |
| 3770354 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.58 | 41.0 | 3.49e-01 | 77.1% | 62.4% |
| 3881967 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.57 | 41.0 | 3.56e-01 | 79.2% | 58.7% |
| 3476174 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.57 | 41.0 | 3.43e-01 | 79.2% | 46.7% |
| 4978364 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.57 | 48.0 | 3.73e-01 | 100.0% | 67.8% |
| 3266098 | 376.1.1.45 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-NOSIP | 0.57 | 40.0 | 3.40e-01 | 77.1% | 63.5% |
| 4022395 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.56 | 40.0 | 3.67e-01 | 77.1% | 67.7% |
| 3993815 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.56 | 40.0 | 3.26e-01 | 79.2% | 42.0% |
| 3257904 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.56 | 39.0 | 3.19e-01 | 77.1% | 40.0% |
| 4330785 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.56 | 48.0 | 2.88e-01 | 100.0% | 51.7% |
| 4174818 | 4.8.1.40 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › FlbD | 0.55 | 47.0 | 4.54e-01 | 100.0% | 96.4% |
| None | — | 0.55 | 39.0 | 3.49e-01 | 79.2% | 60.0% | |
| 3531987 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 39.0 | 2.70e-01 | 83.3% | 28.1% |
| 3354588 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.55 | 38.0 | 3.62e-01 | 75.0% | 78.3% |
| 4984512 | 2002.1.1.208 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › BtpA | 0.54 | 44.0 | 2.80e-01 | 97.9% | 31.1% |
| 118946 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.50 | 35.0 | 3.29e-01 | 77.1% | 92.4% |