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OP172818.1__WAX17040.1__PD691P6_00035__00035

Bact-Vir

OP172818.1__WAX17040.1__PD691P6_00035__00035

Identity

Accession:
OP172818 ↗
Kingdom:
phage

Quality

84.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-81
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 56.0 5.86e-01 100.0% 93.1%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 49.0 4.58e-01 73.4% 81.2%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.85e-01 100.0% 95.8%
2db9A01 3.90.70.200 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain 0.65 57.0 4.80e-01 100.0% 57.1%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 52.0 4.76e-01 86.1% 84.6%
4jbjA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 51.0 4.53e-01 83.5% 71.8%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 4.75e-01 100.0% 70.7%
1o7iB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 49.0 4.34e-01 83.5% 71.9%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 49.0 4.47e-01 86.1% 91.6%
1b7eA01 3.90.350.10 Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.62 44.0 3.18e-01 74.7% 80.9%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.62 53.0 4.52e-01 100.0% 56.8%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 50.0 3.67e-01 86.1% 46.3%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 50.0 4.52e-01 84.8% 88.5%
1fguB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 49.0 4.51e-01 86.1% 95.2%
4ksnA00 6.20.250.80 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.62 43.0 4.70e-01 94.9% 87.7%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 39.0 4.34e-01 84.8% 85.2%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 46.0 4.29e-01 84.8% 87.4%
2e1qC01 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.60 42.0 3.99e-01 100.0% 63.0%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 46.0 3.72e-01 87.3% 83.4%
4w78G00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 43.0 3.48e-01 82.3% 96.9%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 48.0 4.33e-01 93.7% 90.8%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.57 46.0 4.52e-01 92.4% 80.5%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 45.0 3.36e-01 88.6% 86.8%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 49.0 4.11e-01 98.7% 94.9%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.55 45.0 3.96e-01 91.1% 82.6%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 36.0 4.02e-01 89.9% 89.7%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 41.0 3.90e-01 79.7% 68.1%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.55 46.0 3.74e-01 96.2% 82.1%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 46.0 4.21e-01 92.4% 85.4%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 37.0 3.96e-01 82.3% 83.8%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.55 42.0 3.48e-01 92.4% 44.4%
1cqxA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 46.0 4.07e-01 100.0% 65.8%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 44.0 2.93e-01 91.1% 22.4%
2gtlN02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.53 46.0 3.66e-01 100.0% 70.6%
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.53 41.0 3.76e-01 82.3% 84.3%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.52 43.0 3.08e-01 98.7% 57.2%
4a6fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 4.03e-01 94.9% 88.6%
2rgqB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 43.0 3.68e-01 93.7% 87.2%
2ia1A01 3.30.500.20 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains 0.50 37.0 3.24e-01 100.0% 52.1%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5078763 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 52.0 4.67e-01 78.5% 92.7%
3322460 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.69 59.0 5.16e-01 100.0% 63.5%
3358748 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.68 59.0 5.89e-01 100.0% 91.3%
3254941 4.18.1.1 beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.66 59.0 4.93e-01 100.0% 58.5%
3837281 4.18.1.1 beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.66 60.0 4.60e-01 100.0% 45.9%
5037301 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.66 51.0 4.83e-01 82.3% 88.3%
3931783 1.1.7.41 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.66 52.0 4.89e-01 100.0% 69.5%
3742215 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.65 49.0 4.72e-01 79.7% 97.8%
3329012 4.18.1.1 beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.65 59.0 4.67e-01 100.0% 50.3%
3650296 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.65 58.0 5.47e-01 100.0% 81.1%
5054824 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 50.0 4.41e-01 83.5% 76.5%
5036293 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 49.0 4.59e-01 83.5% 88.0%
376155 1.1.17.2 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.64 50.0 3.72e-01 84.8% 46.4%
3603237 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 49.0 4.48e-01 83.5% 86.7%
5072499 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.63 50.0 3.70e-01 84.8% 44.5%
5069581 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 50.0 4.46e-01 86.1% 84.5%
4934695 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 50.0 4.42e-01 87.3% 78.3%
5066015 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.62 49.0 4.48e-01 84.8% 91.4%
3520847 243.5.1.0 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.62 53.0 5.33e-01 94.9% 95.0%
5035745 2.1.1.123 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3 0.62 49.0 4.50e-01 86.1% 90.5%
5036291 2.1.1.123 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3 0.61 47.0 4.25e-01 83.5% 80.0%
3603247 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.61 47.0 4.16e-01 84.8% 86.7%
4940586 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 49.0 4.27e-01 87.3% 79.2%
5030515 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.61 49.0 4.35e-01 87.3% 85.2%
5028149 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 48.0 4.30e-01 87.3% 85.2%
3670792 243.3.1.67 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Phytochelatin_C 0.60 45.0 4.89e-01 84.8% 98.5%
3770801 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.60 54.0 5.13e-01 100.0% 85.3%
4927081 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.60 52.0 4.33e-01 98.7% 94.5%
4940587 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 48.0 4.31e-01 87.3% 87.3%
4295399 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.60 54.0 5.01e-01 100.0% 84.0%
4974918 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.60 47.0 4.33e-01 86.1% 83.8%
4943942 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 46.0 4.24e-01 83.5% 81.9%
5004107 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.60 48.0 4.30e-01 87.3% 88.2%
4646070 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 47.0 4.26e-01 87.3% 87.3%
4948119 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.59 52.0 4.57e-01 98.7% 94.2%
5041944 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 47.0 4.31e-01 87.3% 90.5%
5016162 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 46.0 4.07e-01 86.1% 84.2%
4405445 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 44.0 4.65e-01 93.7% 94.3%
4943785 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 44.0 3.72e-01 82.3% 69.3%
5068667 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.58 45.0 4.12e-01 83.5% 75.2%
4993469 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 49.0 4.91e-01 94.9% 95.0%
4245955 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.58 44.0 3.78e-01 82.3% 64.6%
4119536 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.58 44.0 3.76e-01 82.3% 65.4%
4935901 2.1.1.382 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28814 0.58 46.0 4.48e-01 86.1% 85.4%
3286982 330.6.1.0 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 0.58 44.0 4.04e-01 82.3% 94.2%
5070387 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 46.0 4.74e-01 94.9% 96.0%
5001821 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.56 45.0 4.12e-01 87.3% 85.7%
4117325 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.56 46.0 3.94e-01 94.9% 55.4%
4199183 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 49.0 4.02e-01 98.7% 95.2%
4145173 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.56 45.0 4.16e-01 89.9% 93.3%
3588473 243.1.1.17 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TpcC 0.55 46.0 4.12e-01 89.9% 83.3%
5059673 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 43.0 4.03e-01 86.1% 83.0%
3614906 4.26.1.8 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Saf4_Yju2 0.55 44.0 4.59e-01 86.1% 100.0%
3804776 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.55 39.0 2.66e-01 93.7% 19.4%
2883156 243.1.1.17 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TpcC 0.54 45.0 3.94e-01 92.4% 70.7%
5046173 4252.1.1.7 beta barrels › AttH-like › AttH-like › AttH-like › Tocopherol_cycl 0.54 42.0 3.56e-01 87.3% 95.2%
3405941 4184.1.1.1 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.54 39.0 4.16e-01 94.9% 89.7%
3587863 3158.1.1.1 beta barrels › uncharacterized protein RUMGNA_01417 › uncharacterized protein RUMGNA_01417 › uncharacterized protein RUMGNA_01417 › DUF5348 0.54 43.0 4.22e-01 100.0% 81.2%
5021455 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.53 46.0 3.91e-01 98.7% 95.6%
4510000 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 42.0 3.82e-01 93.7% 64.5%
4087511 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.52 42.0 3.86e-01 92.4% 90.0%
3257116 243.1.1.36 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_5 0.51 41.0 3.80e-01 92.4% 94.5%
3271321 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.51 41.0 3.54e-01 93.7% 77.0%
3625308 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.50 35.0 3.03e-01 73.4% 59.2%