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OP172819.1__WAX17064.1__PF672P1_00006__00006

Bact-Vir

OP172819.1__WAX17064.1__PF672P1_00006__00006

Identity

Accession:
OP172819 ↗
Kingdom:
phage

Quality

74.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Parabacteroides_phage_PF672P1

TaxID: 2968684

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 57-152
PDB
Domain cluster: rep: IMGVR_UViG_3300033781_000034-3300033781-Ga0326759_00004_125332_128028__D740-834
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 45.0 4.81e-01 87.5% 76.5%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 5.13e-01 92.7% 76.7%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 5.36e-01 90.6% 86.7%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 5.28e-01 92.7% 86.8%
3gz5B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 42.0 4.72e-01 85.4% 85.1%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 5.13e-01 89.6% 81.6%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 42.0 4.67e-01 87.5% 83.1%
4fcyB02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 40.0 4.70e-01 87.5% 93.8%
2ly1A03 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.63 42.0 4.49e-01 87.5% 80.2%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.68e-01 87.5% 86.7%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 4.15e-01 89.6% 66.1%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 39.0 4.42e-01 86.5% 92.9%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 38.0 3.78e-01 87.5% 62.1%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 38.0 4.09e-01 87.5% 80.5%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.11e-01 89.6% 72.8%
4lecA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 35.0 2.78e-01 87.5% 30.2%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.53 37.0 3.88e-01 87.5% 82.4%
1io7A00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.52 41.0 2.80e-01 86.5% 73.5%
7d58G01 3.30.1490.120 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain 0.52 33.0 3.65e-01 94.8% 82.7%
3dp7A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 35.0 3.01e-01 87.5% 42.1%
2qecA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 35.0 2.99e-01 74.0% 65.6%
4i68A00 3.30.70.1800 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 33.0 3.40e-01 88.5% 71.1%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5081315 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 62.0 6.91e-01 93.8% 100.0%
3954610 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 60.0 6.66e-01 95.8% 98.7%
5003621 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 65.0 6.54e-01 97.9% 87.4%
5029778 101.1.2.43 ↗ alpha arrays › HTH › HTH › winged helix domain › Pox_D5 0.77 63.0 6.55e-01 95.8% 92.2%
3688358 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.75 56.0 6.03e-01 88.5% 92.5%
3729476 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.75 56.0 5.29e-01 94.8% 65.2%
4012878 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 57.0 5.33e-01 92.7% 66.1%
3938377 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.74 57.0 6.02e-01 92.7% 90.6%
3177239 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.74 57.0 5.05e-01 93.8% 57.8%
4976651 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 50.0 5.79e-01 88.5% 100.0%
3883278 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.71 60.0 6.05e-01 99.0% 91.6%
3479827 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 48.0 5.02e-01 88.5% 79.5%
4983039 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 54.0 5.38e-01 90.6% 82.8%
5052010 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 51.0 5.56e-01 89.6% 96.2%
4173782 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 55.0 5.18e-01 91.7% 74.8%
2056822 101.1.2.213 ↗ alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.65 43.0 4.74e-01 81.2% 85.5%
4593646 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 46.0 4.75e-01 89.6% 78.9%
3282970 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 43.0 5.08e-01 80.2% 100.0%
4284507 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.64 53.0 5.21e-01 90.6% 81.0%
2056399 101.1.2.213 ↗ alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.64 42.0 4.63e-01 82.3% 84.2%
5065786 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.64 52.0 4.86e-01 92.7% 70.0%
5011183 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.64 55.0 5.27e-01 92.7% 80.9%
5073929 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.63 53.0 5.04e-01 92.7% 77.3%
5055466 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.63 54.0 5.11e-01 92.7% 81.7%
5065308 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 53.0 4.91e-01 92.7% 73.3%
5035685 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 48.0 4.42e-01 89.6% 63.7%
4109840 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 51.0 5.03e-01 90.6% 84.0%
5027116 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 53.0 5.01e-01 92.7% 77.4%
5050129 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 54.0 5.16e-01 94.8% 81.8%
3927517 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 52.0 5.12e-01 92.7% 85.0%
5025840 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 50.0 4.98e-01 92.7% 84.0%
4948099 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 53.0 5.03e-01 92.7% 80.0%
4947441 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 41.0 4.29e-01 87.5% 76.5%
4960288 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 46.0 3.81e-01 89.6% 44.0%
4982781 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.61 52.0 5.00e-01 94.8% 80.0%
4940432 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 45.0 4.64e-01 87.5% 83.3%
4487383 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.61 55.0 5.23e-01 96.9% 92.7%
4957324 101.1.2.920 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.61 42.0 3.90e-01 89.6% 55.2%
4217713 327.21.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › SpoIIE regulatory domain › SpoIIE regulatory domain › PF31108 0.60 32.0 3.43e-01 87.5% 56.5%
5017942 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.60 40.0 3.98e-01 87.5% 65.0%
5000349 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.59 53.0 4.93e-01 96.9% 88.3%
None — 0.59 45.0 4.62e-01 88.5% 86.7%
5001098 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 42.0 4.37e-01 88.5% 81.1%
3287678 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.57 40.0 4.26e-01 87.5% 87.5%
5030045 213.1.1.31 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.57 37.0 3.18e-01 88.5% 41.6%
3163573 101.1.2.52 ↗ alpha arrays › HTH › HTH › winged helix domain › KicB 0.56 46.0 4.40e-01 90.6% 80.0%
4328415 3018.1.1.0 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.56 38.0 4.06e-01 85.4% 78.8%
5075009 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 40.0 4.10e-01 89.6% 77.9%
3893366 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 35.0 2.89e-01 88.5% 33.7%
5083360 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 35.0 3.05e-01 88.5% 42.4%
3725835 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.53 41.0 2.99e-01 83.3% 47.1%
3438648 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.53 32.0 2.72e-01 71.9% 36.8%
4976186 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.52 43.0 3.67e-01 89.6% 59.4%
5016400 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.52 43.0 3.20e-01 90.6% 40.4%
4942466 3110.1.1.0 ↗ a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.51 33.0 2.82e-01 87.5% 38.1%
3978456 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.50 31.0 2.73e-01 74.0% 40.0%
4303875 3018.1.1.0 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.50 36.0 3.71e-01 84.4% 78.9%