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OP172819.1__WAX17085.1__PF672P1_00027__00027
Bact-VirOP172819.1__WAX17085.1__PF672P1_00027__00027
Identity
- Accession:
- OP172819 ↗
- Kingdom:
- phage
Quality
85.3
mean pLDDT
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-46
Domain cluster:
rep: IMGVR_UViG_3300005835_000100-3300005835-Ga0078910_10067915__D4-44
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3goxA02 | 3.30.60.130 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.84 | 75.0 | 6.94e-01 | 95.5% | 79.6% |
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.83 | 64.0 | 4.45e-01 | 100.0% | 26.8% |
| 1y02A01 | 1.10.720.140 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.82 | 60.0 | 4.95e-01 | 100.0% | 44.9% |
| 8eb0A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.81 | 66.0 | 5.30e-01 | 97.7% | 46.5% |
| 7v8fB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.79 | 66.0 | 5.17e-01 | 100.0% | 44.6% |
| 1zbdB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.78 | 71.0 | 5.04e-01 | 100.0% | 35.8% |
| 2gviA03 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.74 | 50.0 | 5.44e-01 | 81.8% | 91.2% |
| 2cjsC01 | 3.30.60.120 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.67 | 52.0 | 5.53e-01 | 86.4% | 100.0% |
| 1jy2O00 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 37.0 | 3.52e-01 | 100.0% | 45.1% |
| 5y20A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 47.0 | 4.53e-01 | 81.8% | 69.2% |
| 2grvA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.63 | 38.0 | 2.87e-01 | 72.7% | 23.0% |
| 4fhdA02 | 3.80.30.30 | Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme › | 0.62 | 43.0 | 2.75e-01 | 97.7% | 14.5% |
| 3b8mC02 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 42.0 | 3.15e-01 | 72.7% | 30.8% |
| 1qo2A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 40.0 | 2.56e-01 | 70.5% | 12.5% |
| 1m1jB03 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 37.0 | 2.57e-01 | 100.0% | 19.4% |
| 2ysmA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 48.0 | 3.57e-01 | 97.7% | 36.9% |
| 3hcsA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 39.0 | 3.82e-01 | 100.0% | 67.3% |
| 1a7iA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.55 | 43.0 | 3.98e-01 | 93.2% | 88.3% |
| 1yuiA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 37.0 | 3.50e-01 | 79.5% | 63.0% |
| 2aw4Z00 | 4.10.830.30 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › Ribosomal protein L31 | 0.51 | 38.0 | 3.47e-01 | 90.9% | 84.3% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979944 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.99 | 81.0 | 8.55e-01 | 86.4% | 95.0% |
| 3744636 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.86 | 72.0 | 5.66e-01 | 100.0% | 45.6% |
| 3211179 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.85 | 72.0 | 5.72e-01 | 100.0% | 48.2% |
| 4015300 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.85 | 78.0 | 6.13e-01 | 100.0% | 54.1% |
| 3869401 | 376.1.3.4 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_2 | 0.83 | 69.0 | 4.80e-01 | 100.0% | 29.3% |
| 3891438 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.78 | 65.0 | 5.05e-01 | 97.7% | 43.2% |
| 4941564 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.77 | 50.0 | 5.72e-01 | 79.5% | 100.0% |
| 3233807 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.75 | 60.0 | 5.22e-01 | 95.5% | 57.1% |
| 3181845 | 376.1.1.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ | 0.75 | 56.0 | 5.36e-01 | 84.1% | 70.0% |
| 3567692 | 376.1.3.85 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › Znf_SCAND3 | 0.75 | 66.0 | 6.39e-01 | 100.0% | 92.0% |
| 3692666 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 48.0 | 5.53e-01 | 77.3% | 100.0% |
| 3233854 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 50.0 | 4.98e-01 | 86.4% | 68.9% |
| 3926338 | 376.1.1.94 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_IRF-2BP1_2 | 0.73 | 60.0 | 4.74e-01 | 97.7% | 43.2% |
| 3877617 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.73 | 59.0 | 4.87e-01 | 97.7% | 49.4% |
| 3606495 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.72 | 58.0 | 5.04e-01 | 86.4% | 59.4% |
| 3799902 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.72 | 53.0 | 5.33e-01 | 93.2% | 80.0% |
| 3211002 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 59.0 | 5.10e-01 | 95.5% | 84.3% |
| 3818617 | 376.1.1.103 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_Vps41 | 0.70 | 55.0 | 5.20e-01 | 97.7% | 72.7% |
| 3301048 | 376.1.1.19 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv | 0.69 | 54.0 | 5.64e-01 | 93.2% | 97.5% |
| 3700533 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 57.0 | 3.55e-01 | 97.7% | 22.6% |
| 5033522 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 57.0 | 5.55e-01 | 100.0% | 86.0% |
| 3620075 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.68 | 57.0 | 4.58e-01 | 100.0% | 47.4% |
| 3211971 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.68 | 53.0 | 5.51e-01 | 97.7% | 100.0% |
| 3937568 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.67 | 54.0 | 4.50e-01 | 95.5% | 51.8% |
| 3221807 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.66 | 54.0 | 4.83e-01 | 95.5% | 92.3% |
| 4940846 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.65 | 55.0 | 4.99e-01 | 93.2% | 71.2% |
| 3372361 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.65 | 50.0 | 5.17e-01 | 86.4% | 95.0% |
| 4977157 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.65 | 52.0 | 5.24e-01 | 93.2% | 88.9% |
| 3566304 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.65 | 51.0 | 5.28e-01 | 93.2% | 95.0% |
| 3846283 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.65 | 51.0 | 4.97e-01 | 95.5% | 80.0% |
| 3298356 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.65 | 42.0 | 4.62e-01 | 77.3% | 100.0% |
| 3232605 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 47.0 | 5.16e-01 | 81.8% | 100.0% |
| 4011643 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 54.0 | 4.34e-01 | 97.7% | 47.8% |
| 3481685 | 376.1.3.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › RIM2a_ZnF | 0.64 | 47.0 | 4.54e-01 | 79.5% | 70.0% |
| 3701455 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.64 | 50.0 | 4.65e-01 | 86.4% | 76.4% |
| 5049855 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 49.0 | 4.57e-01 | 95.5% | 68.3% |
| 4946657 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.62 | 54.0 | 4.78e-01 | 100.0% | 75.4% |
| 3385531 | 377.1.1.31 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YHS | 0.61 | 49.0 | 4.89e-01 | 93.2% | 88.9% |
| 3255059 | 375.1.1.297 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-MYND | 0.61 | 43.0 | 4.64e-01 | 81.8% | 100.0% |
| 4562058 | 377.1.1.31 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YHS | 0.61 | 47.0 | 4.74e-01 | 90.9% | 86.7% |
| 4985634 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.60 | 49.0 | 4.38e-01 | 93.2% | 76.2% |
| 3371570 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 41.0 | 2.80e-01 | 72.7% | 21.3% |
| 3177203 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.58 | 41.0 | 4.16e-01 | 84.1% | 77.8% |
| 3435304 | 376.1.1.52 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › LIM | 0.57 | 48.0 | 4.32e-01 | 100.0% | 84.6% |
| 3262764 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.56 | 42.0 | 2.81e-01 | 93.2% | 18.1% |
| 5071141 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.54 | 44.0 | 4.45e-01 | 93.2% | 93.3% |
| 3907975 | 377.1.1.50 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › ZMYM4 | 0.53 | 42.0 | 4.23e-01 | 100.0% | 97.8% |
| 5010149 | 377.1.1.131 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TRASH_HVO_1752_C | 0.52 | 37.0 | 3.84e-01 | 90.9% | 95.0% |
| 5046264 | 243.1.1.126 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF6935 | 0.50 | 38.0 | 2.63e-01 | 79.5% | 29.7% |