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OP172835.1__WAX17925.1__PM708P4_00018__00018

Bact-Vir

OP172835.1__WAX17925.1__PM708P4_00018__00018

Identity

Accession:
OP172835 ↗
Kingdom:
phage

Quality

84.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-58
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 60.0 5.88e-01 87.5% 76.7%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 58.0 5.53e-01 94.6% 74.2%
2awnC02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.72 49.0 4.40e-01 71.4% 78.2%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 5.10e-01 91.1% 70.2%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 50.0 5.35e-01 80.4% 89.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.69 55.0 5.29e-01 91.1% 83.6%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.69 56.0 5.67e-01 98.2% 94.4%
2m0yA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 59.0 5.38e-01 96.4% 82.4%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.69 55.0 5.43e-01 91.1% 83.1%
3v8uA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.69 47.0 3.54e-01 73.2% 92.2%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.69 55.0 5.22e-01 89.3% 77.3%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.68 52.0 5.63e-01 82.1% 100.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 55.0 5.31e-01 94.6% 98.4%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 50.0 5.05e-01 87.5% 83.9%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 52.0 4.78e-01 89.3% 88.2%
3k2zA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.65 56.0 4.47e-01 100.0% 76.5%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 55.0 4.29e-01 96.4% 64.8%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.65 56.0 4.50e-01 100.0% 55.8%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.64 50.0 5.28e-01 87.5% 100.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 51.0 4.94e-01 96.4% 78.1%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 50.0 4.04e-01 91.1% 51.3%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 53.0 4.11e-01 96.4% 61.8%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 54.0 4.59e-01 96.4% 87.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 55.0 4.72e-01 100.0% 90.0%
6ovbA03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.63 51.0 3.57e-01 91.1% 98.9%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 50.0 4.70e-01 96.4% 71.2%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 51.0 4.40e-01 92.9% 79.3%
1jheA00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.62 53.0 4.20e-01 100.0% 51.6%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.62 48.0 4.39e-01 89.3% 85.0%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.62 48.0 4.96e-01 87.5% 100.0%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 50.0 4.71e-01 96.4% 98.6%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 45.0 3.53e-01 80.4% 45.7%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 50.0 4.02e-01 98.2% 57.6%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 47.0 4.22e-01 91.1% 79.5%
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 42.0 3.69e-01 76.8% 84.4%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 47.0 3.83e-01 91.1% 63.2%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.59 48.0 3.42e-01 96.4% 85.6%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 40.0 3.85e-01 75.0% 76.9%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.56 41.0 3.72e-01 83.9% 54.0%
3ci0J02 2.10.70.20 Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains 0.56 37.0 3.87e-01 98.2% 76.0%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.56 40.0 3.61e-01 78.6% 100.0%
3jqwC00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.55 41.0 3.23e-01 100.0% 37.2%
3nqkA02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.54 42.0 3.17e-01 91.1% 89.4%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 39.0 3.96e-01 83.9% 82.8%
4a18O00 3.30.390.110 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.52 42.0 3.28e-01 92.9% 65.7%
1vwxH02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.52 36.0 3.13e-01 78.6% 51.5%
3cwzB03 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.51 37.0 2.93e-01 78.6% 92.6%
2hvwA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.51 43.0 3.23e-01 98.2% 78.9%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 43.0 3.62e-01 96.4% 72.2%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3931379 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 53.0 5.37e-01 73.2% 89.1%
3930014 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.75 56.0 4.05e-01 82.1% 87.5%
5002601 4.1.1.485 beta barrels › SH3 › SH3 › SH3 › DUF6897 0.74 57.0 5.65e-01 89.3% 79.7%
3620554 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 63.0 5.31e-01 96.4% 58.9%
3404643 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 57.0 5.36e-01 85.7% 71.4%
4044896 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 60.0 5.47e-01 96.4% 68.0%
3669214 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.74 59.0 4.51e-01 89.3% 56.9%
4927654 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 58.0 5.59e-01 89.3% 83.1%
4031947 4.1.1.62 beta barrels › SH3 › SH3 › SH3 › DUF1811 0.73 52.0 5.42e-01 85.7% 86.0%
3964846 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.72 52.0 4.54e-01 85.7% 50.6%
3603357 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 57.0 5.80e-01 91.1% 89.1%
5000308 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.72 56.0 5.94e-01 92.9% 100.0%
3668420 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.71 61.0 4.26e-01 98.2% 74.7%
3943751 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 56.0 5.39e-01 87.5% 75.4%
4200330 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.71 56.0 4.41e-01 96.4% 40.0%
3784334 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.71 53.0 5.25e-01 87.5% 76.7%
4026678 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.71 56.0 5.28e-01 94.6% 71.4%
3622846 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.70 56.0 5.86e-01 94.6% 98.0%
171891 4.1.1.110 beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.70 55.0 5.61e-01 94.6% 90.9%
3786430 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 52.0 5.46e-01 87.5% 92.0%
3931805 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 53.0 5.51e-01 82.1% 94.0%
3225816 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 57.0 5.30e-01 91.1% 94.3%
4251669 4.1.1.76 beta barrels › SH3 › SH3 › SH3 › NdhO 0.70 54.0 5.08e-01 85.7% 92.9%
4874733 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.61e-01 96.4% 92.6%
3627275 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 56.0 5.47e-01 89.3% 100.0%
3928136 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 55.0 5.41e-01 87.5% 90.0%
3240406 4.1.1.347 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.69 57.0 4.54e-01 96.4% 45.2%
3909202 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 56.0 5.30e-01 92.9% 85.7%
3230400 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 56.0 5.35e-01 91.1% 98.5%
3924038 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.32e-01 96.4% 90.7%
3688068 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.68 58.0 4.27e-01 96.4% 84.7%
3601070 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 54.0 5.17e-01 87.5% 92.3%
3850131 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 57.0 5.03e-01 96.4% 87.1%
3575066 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 54.0 5.30e-01 87.5% 98.3%
3900236 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 54.0 5.38e-01 91.1% 100.0%
3905176 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 54.0 5.22e-01 91.1% 92.3%
3926430 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 55.0 5.39e-01 91.1% 90.0%
3710582 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 56.0 4.64e-01 94.6% 50.5%
3550644 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.64e-01 98.2% 94.5%
4493478 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.67 57.0 4.49e-01 100.0% 50.0%
3930366 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 53.0 5.28e-01 89.3% 93.3%
3709029 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 55.0 5.44e-01 96.4% 86.7%
3238405 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 52.0 5.33e-01 91.1% 89.1%
3576443 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 57.0 5.36e-01 98.2% 98.6%
3927795 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 53.0 5.27e-01 89.3% 93.3%
3625555 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 49.0 5.00e-01 80.4% 100.0%
3616622 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.45e-01 94.6% 95.2%
5047239 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 55.0 5.28e-01 96.4% 81.2%
4669027 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.67 55.0 3.68e-01 94.6% 46.7%
3578208 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 54.0 5.47e-01 91.1% 100.0%
3933539 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.42e-01 96.4% 89.2%
3706998 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.30e-01 92.9% 85.0%
4947695 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 51.0 4.70e-01 85.7% 84.0%
3963760 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.66 55.0 4.22e-01 98.2% 52.4%
3922426 4.1.1.363 beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 0.66 55.0 4.34e-01 98.2% 44.2%
3934192 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 55.0 5.42e-01 96.4% 95.0%
3626166 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 47.0 4.16e-01 76.8% 83.5%
3514556 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 53.0 4.96e-01 89.3% 75.7%
3981575 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.47e-01 94.6% 94.5%
3793311 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 50.0 4.96e-01 85.7% 98.3%
3503291 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.65 55.0 4.47e-01 96.4% 70.0%
3398496 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 51.0 5.22e-01 96.4% 90.9%
3852545 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 51.0 5.04e-01 94.6% 83.3%
3275615 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 54.0 4.18e-01 96.4% 44.2%
5027607 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.64 45.0 4.09e-01 73.2% 58.7%
3619619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 50.0 4.72e-01 89.3% 77.1%
3882696 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.62 52.0 4.72e-01 96.4% 78.8%
4448678 4.1.1.307 beta barrels › SH3 › SH3 › SH3 › PF26132 0.61 50.0 4.66e-01 98.2% 98.7%
1408049 4.1.1.217 beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.61 51.0 3.89e-01 96.4% 55.9%
2363 4200.1.1.1 beta barrels › YmcC-like › YmcC-like › YmcC-like › YjbF 0.59 48.0 3.42e-01 96.4% 85.6%
3978775 4200.1.1.1 beta barrels › YmcC-like › YmcC-like › YmcC-like › YjbF 0.55 45.0 3.24e-01 96.4% 85.5%
4947101 318.1.1.0 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.54 39.0 3.39e-01 78.6% 51.6%
3283490 211.1.1.11 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_6 0.51 34.0 2.86e-01 76.8% 34.8%
3931769 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 41.0 3.26e-01 96.4% 93.3%
3790270 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.51 36.0 3.81e-01 83.9% 86.0%
3452728 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.50 44.0 3.02e-01 100.0% 58.5%