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OP172837.1__WAX18019.1__SG586P3_00014__00014
Bact-VirOP172837.1__WAX18019.1__SG586P3_00014__00014
Identity
- Accession:
- OP172837 ↗
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-159
Domain cluster:
rep: OL774877.1__UJH95051.1__MissG1_0001__00001__D3-139
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05257.23 best | CHAP | 39.2 | 1.10e-09 | 61.7% | 96.3% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k3aA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.75 | 48.0 | 5.82e-01 | 83.8% | 98.0% |
| 4cshA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.75 | 72.0 | 7.03e-01 | 100.0% | 95.1% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.71 | 67.0 | 5.87e-01 | 100.0% | 70.9% |
| 4g29A00 | 3.10.670.10 | Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. | 0.53 | 40.0 | 3.90e-01 | 95.5% | 71.1% |
| 2kgyA00 | 3.30.505.20 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › | 0.51 | 30.0 | 3.71e-01 | 78.6% | 96.7% |
| 4w79A00 | 3.10.620.10 | Alpha Beta › Roll › C8orf32 fold › Protein N-terminal glutamine amidohydrolase, alpha beta roll | 0.50 | 39.0 | 3.58e-01 | 95.5% | 61.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034059 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.84 | 73.0 | 7.53e-01 | 100.0% | 95.9% |
| 4182884 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.76 | 55.0 | 6.29e-01 | 89.0% | 98.3% |
| 4031159 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.75 | 57.0 | 5.76e-01 | 95.5% | 79.2% |
| 1293874 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.74 | 71.0 | 6.95e-01 | 100.0% | 94.5% |
| 4882197 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.73 | 50.0 | 5.69e-01 | 83.8% | 91.5% |
| 4949773 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.71 | 38.0 | 3.94e-01 | 87.7% | 54.5% |
| 2990058 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.69 | 65.0 | 5.30e-01 | 100.0% | 65.4% |
| 4483091 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 30.0 | 3.54e-01 | 96.8% | 71.4% |
| 3755862 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 28.0 | 3.45e-01 | 97.4% | 71.6% |
| 3218322 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 32.0 | 3.78e-01 | 100.0% | 85.7% |
| 4856373 | 219.1.1.47 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Nt_Gln_amidase | 0.51 | 39.0 | 3.59e-01 | 95.5% | 61.9% |
| 3585918 | 11.1.1.532 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C6 | 0.50 | 28.0 | 3.39e-01 | 85.7% | 83.0% |
D2
high
residues 181-255
Domain cluster:
rep: MK448926.1__QBX27511.1__Javan392_0055__00055__D345-414
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l9aX01 | 3.30.720.180 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.80 | 73.0 | 7.33e-01 | 100.0% | 98.7% |
| 4ioyX02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 49.0 | 4.24e-01 | 96.0% | 56.5% |
| 3a7rA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 45.0 | 3.22e-01 | 88.0% | 82.7% |
| 6srbA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 39.0 | 3.74e-01 | 100.0% | 69.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 119459 | 3120.1.1.0 ↗ | 0.80 | 73.0 | 7.11e-01 | 100.0% | 91.4% | |
| 4541110 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.60 | 34.0 | 2.34e-01 | 100.0% | 16.1% |
| 4150329 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.59 | 34.0 | 2.74e-01 | 100.0% | 28.3% |
| 3170319 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.59 | 43.0 | 4.73e-01 | 82.7% | 96.7% |
| 3954618 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 51.0 | 4.54e-01 | 100.0% | 98.2% |
| 3788806 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.58 | 42.0 | 4.59e-01 | 78.7% | 98.3% |
| 4431514 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.56 | 47.0 | 3.88e-01 | 94.7% | 96.4% |
| 3723574 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.55 | 42.0 | 3.80e-01 | 82.7% | 63.8% |
| 3239048 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 46.0 | 3.83e-01 | 100.0% | 84.8% |
| 4652181 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.54 | 47.0 | 3.71e-01 | 100.0% | 87.5% |
| 5052885 | 2484.1.1.101 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 | 0.53 | 44.0 | 3.22e-01 | 96.0% | 95.2% |
| 3692182 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.53 | 42.0 | 4.33e-01 | 86.7% | 95.7% |
| 4956621 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.52 | 42.0 | 3.09e-01 | 96.0% | 74.7% |
| 3644383 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 36.0 | 3.37e-01 | 76.0% | 95.0% |
| 4509605 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.50 | 43.0 | 3.62e-01 | 100.0% | 85.0% |