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OP172837.1__WAX18031.1__SG586P3_00026__00026
Bact-VirOP172837.1__WAX18031.1__SG586P3_00026__00026
Identity
- Accession:
- OP172837 ↗
- Kingdom:
- phage
Quality
89.9
mean pLDDT
Cluster
View cluster (80 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 42-116
Domain cluster:
rep: OM868076.1__UPT53046.1__X__00012__D42-112
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7wu7501 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 46.0 | 3.85e-01 | 77.3% | 84.1% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 42.0 | 3.49e-01 | 76.0% | 75.2% |
| 4jn3A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.58 | 46.0 | 3.32e-01 | 86.7% | 60.4% |
| 3cjlA00 | 3.10.20.850 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861 | 0.57 | 30.0 | 2.89e-01 | 77.3% | 44.3% |
| 2y9wA00 | 1.10.1280.10 | Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase | 0.56 | 46.0 | 2.97e-01 | 94.7% | 90.8% |
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.55 | 33.0 | 3.63e-01 | 73.3% | 75.9% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.55 | 45.0 | 2.96e-01 | 97.3% | 71.0% |
| 4gdxB00 | 3.60.20.40 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit | 0.54 | 40.0 | 3.06e-01 | 81.3% | 90.5% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.53 | 38.0 | 2.74e-01 | 76.0% | 91.8% |
| 3gwmA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.52 | 33.0 | 2.85e-01 | 76.0% | 37.2% |
| 1ceeB00 | 3.90.810.10 | Alpha Beta › Alpha-Beta Complex › SerineThreonine-protein kinase PAK-alpha; Chain A › CRIB domain | 0.52 | 29.0 | 3.12e-01 | 84.0% | 62.7% |
| 2r6fA06 | 1.20.1580.10 | Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain | 0.51 | 37.0 | 3.14e-01 | 78.7% | 99.3% |
| 2arpF02 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.51 | 25.0 | 2.56e-01 | 89.3% | 45.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3495740 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.59 | 50.0 | 3.84e-01 | 100.0% | 91.1% |
| 4140340 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.58 | 43.0 | 3.47e-01 | 80.0% | 98.7% |
| 3565062 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.58 | 46.0 | 3.85e-01 | 89.3% | 96.4% |
| 2403546 | 3758.1.1.0 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins | 0.55 | 39.0 | 2.95e-01 | 78.7% | 80.7% |
| 3452455 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 33.0 | 3.39e-01 | 88.0% | 64.3% |
| 4219320 | 3702.1.1.0 ↗ | beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain | 0.53 | 41.0 | 3.69e-01 | 98.7% | 58.3% |
| 3948520 | 3702.1.1.1 ↗ | beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › PBP_dimer | 0.53 | 41.0 | 3.70e-01 | 98.7% | 60.0% |
| 3165651 | 3702.1.1.1 ↗ | beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › PBP_dimer | 0.52 | 41.0 | 3.54e-01 | 98.7% | 52.8% |
| None | — | 0.52 | 42.0 | 2.80e-01 | 88.0% | 22.7% | |
| 3959713 | 3702.1.1.0 ↗ | beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain | 0.52 | 39.0 | 2.71e-01 | 93.3% | 22.5% |
| 3832703 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.52 | 43.0 | 2.58e-01 | 100.0% | 22.4% |
| 3451364 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 32.0 | 3.40e-01 | 88.0% | 72.3% |