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OP172838.1__WAX18079.1__WC27P1_00024__00024
Bact-VirOP172838.1__WAX18079.1__WC27P1_00024__00024
Identity
- Accession:
- OP172838 ↗
- Kingdom:
- phage
Quality
62.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-71
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4udsA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.75 | 58.0 | 3.89e-01 | 87.5% | 55.3% |
| 5oklA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.66 | 56.0 | 4.36e-01 | 100.0% | 44.6% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 46.0 | 4.15e-01 | 79.2% | 55.4% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.62 | 51.0 | 4.27e-01 | 95.8% | 52.3% |
| 3cwrB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 47.0 | 3.07e-01 | 81.2% | 20.5% |
| 1icrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.59 | 46.0 | 3.16e-01 | 97.9% | 37.0% |
| 7ob9B01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.58 | 49.0 | 3.36e-01 | 100.0% | 63.5% |
| 1uajA02 | 1.10.1270.20 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2 | 0.58 | 46.0 | 4.05e-01 | 89.6% | 72.6% |
| 1gcvB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 45.0 | 3.44e-01 | 100.0% | 36.0% |
| 4e5yD02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.55 | 41.0 | 3.22e-01 | 79.2% | 67.0% |
| 1x3zA03 | 1.10.1740.90 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.52 | 41.0 | 3.59e-01 | 97.9% | 78.4% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 41.0 | 3.19e-01 | 100.0% | 38.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943201 | 181.1.1.32 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54 | 0.76 | 54.0 | 4.37e-01 | 75.0% | 50.6% |
| 4953903 | 194.1.1.7 ↗ | alpha complex topology › Serum albumin-like › Serum albumin-like › Serum albumin-like › Zn_ribbon_2 | 0.75 | 60.0 | 4.92e-01 | 100.0% | 49.4% |
| 5012157 | 605.1.1.354 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › MS_channel_1st_1 | 0.67 | 49.0 | 4.07e-01 | 79.2% | 47.1% |
| 3592006 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.65 | 44.0 | 3.09e-01 | 70.8% | 42.1% |
| 3614251 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.59 | 49.0 | 2.84e-01 | 93.8% | 46.9% |
| 4474891 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.57 | 39.0 | 2.45e-01 | 72.9% | 12.5% |
| 3996998 | 109.26.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C | 0.56 | 45.0 | 2.87e-01 | 100.0% | 56.1% |
| 3727603 | 109.4.1.598 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mak10 | 0.55 | 47.0 | 3.03e-01 | 97.9% | 49.6% |