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OP172840.1__WAX18157.1__WC29P2_00019__00019
Bact-VirOP172840.1__WAX18157.1__WC29P2_00019__00019
Identity
- Accession:
- OP172840 ↗
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-76
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 47.0 | 4.18e-01 | 72.5% | 41.1% |
| 2mh3A00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.79 | 67.0 | 6.09e-01 | 98.0% | 72.9% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.76 | 49.0 | 5.21e-01 | 70.6% | 75.6% |
| 5nj8A01 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.75 | 63.0 | 6.27e-01 | 100.0% | 92.3% |
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.72 | 51.0 | 4.74e-01 | 76.5% | 63.6% |
| 3jr7A01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.71 | 48.0 | 3.62e-01 | 70.6% | 90.7% |
| 2m8gX00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 43.0 | 3.88e-01 | 86.3% | 45.7% |
| 1rr7A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 44.0 | 4.60e-01 | 70.6% | 71.7% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.69 | 54.0 | 3.49e-01 | 86.3% | 19.7% |
| 2h09A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.67 | 53.0 | 5.19e-01 | 90.2% | 98.2% |
| 3k92A01 | 1.10.8.1210 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 51.0 | 4.87e-01 | 82.4% | 70.0% |
| 2hnhA03 | 1.10.10.1600 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain | 0.64 | 44.0 | 3.86e-01 | 72.5% | 80.8% |
| 1k32A03 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.63 | 48.0 | 4.39e-01 | 86.3% | 95.8% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 52.0 | 3.25e-01 | 100.0% | 43.5% |
| 2oqtD00 | 3.40.930.10 | Alpha Beta › 3-Layer(aba) Sandwich › Mannitol-specific EII; Chain A › Mannitol-specific EII; Chain A | 0.58 | 47.0 | 3.43e-01 | 96.1% | 80.8% |
| 7vzrc01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.53 | 43.0 | 3.39e-01 | 92.2% | 84.9% |
| 2avuB00 | 1.10.4000.10 | Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD | 0.52 | 41.0 | 3.19e-01 | 84.3% | 50.0% |
| 2kn6A02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.52 | 38.0 | 3.44e-01 | 88.2% | 59.8% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3400498 | 105.1.1.1 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › HLH | 0.82 | 71.0 | 5.41e-01 | 100.0% | 55.0% |
| 4116972 | 375.1.9.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase | 0.77 | 62.0 | 5.04e-01 | 92.2% | 47.4% |
| 3781724 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.76 | 53.0 | 5.56e-01 | 74.5% | 84.4% |
| 3975777 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 60.0 | 4.92e-01 | 92.2% | 49.5% |
| 4005910 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.72 | 59.0 | 4.78e-01 | 92.2% | 47.0% |
| 3985522 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.72 | 60.0 | 4.79e-01 | 92.2% | 47.0% |
| 3219554 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.70 | 56.0 | 5.66e-01 | 84.3% | 100.0% |
| None | — | 0.70 | 57.0 | 4.53e-01 | 94.1% | 43.5% | |
| 4220399 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.67 | 49.0 | 5.02e-01 | 90.2% | 84.0% |
| 4062718 | 130.1.1.3 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Rho_N | 0.67 | 49.0 | 4.98e-01 | 86.3% | 82.0% |
| 4547236 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.57 | 48.0 | 4.32e-01 | 94.1% | 98.6% |