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OP172840.1__WAX18169.1__WC29P2_00031__00031
Bact-VirOP172840.1__WAX18169.1__WC29P2_00031__00031
Identity
- Accession:
- OP172840 ↗
- Kingdom:
- phage
Quality
88.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-76
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wesB03 | 1.20.89.10 | Mainly Alpha › Up-down Bundle › Nitrogenase Molybdenum-iron Protein, subunit B; domain 4 › Nitrogenase Molybdenum-iron Protein, subunit B, domain 4 | 0.52 | 42.0 | 4.00e-01 | 88.2% | 88.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3178852 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.81 | 74.0 | 5.09e-01 | 98.5% | 36.7% |
| 3741469 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.80 | 72.0 | 5.44e-01 | 100.0% | 53.8% |
| 4017265 | 3343.1.1.2 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal | 0.77 | 68.0 | 3.87e-01 | 98.5% | 10.3% |
| 3610084 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.77 | 60.0 | 3.70e-01 | 82.4% | 17.2% |
| 3926598 | 5059.1.1.17 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TMEM234 | 0.70 | 50.0 | 3.96e-01 | 75.0% | 40.0% |
| 3997881 | 109.4.1.194 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 | 0.58 | 52.0 | 3.41e-01 | 100.0% | 46.1% |
| 3600422 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 47.0 | 2.79e-01 | 92.6% | 34.5% |
D2
high
residues 77-213
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 40.0 | 4.27e-01 | 70.8% | 69.9% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.64 | 45.0 | 3.83e-01 | 71.5% | 68.4% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 38.0 | 4.04e-01 | 76.6% | 73.1% |
| 3pwxA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.57 | 42.0 | 3.73e-01 | 75.9% | 84.2% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.55 | 41.0 | 3.36e-01 | 76.6% | 52.9% |
| 3errA01 | 1.20.920.60 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.52 | 40.0 | 3.45e-01 | 80.3% | 83.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4523639 | 5086.1.1.92 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE | 0.64 | 48.0 | 4.27e-01 | 78.1% | 67.9% |
| 3431604 | 3758.1.1.0 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins | 0.62 | 44.0 | 3.28e-01 | 72.3% | 38.5% |
| None | — | 0.62 | 50.0 | 3.95e-01 | 84.7% | 64.5% | |
| 3784752 | 3748.1.1.3 ↗ | extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › eIF3h_C | 0.60 | 38.0 | 3.98e-01 | 86.1% | 68.8% |