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OP172841.1__WAX18229.1__WC29P3_00050__00050
Bact-VirOP172841.1__WAX18229.1__WC29P3_00050__00050
Identity
- Accession:
- OP172841 ↗
- Kingdom:
- phage
Quality
74.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-83
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gyiA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 36.0 | 3.34e-01 | 77.5% | 45.2% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 37.0 | 3.50e-01 | 98.6% | 52.4% |
| 2h5eA03 | 3.30.70.3280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptide chain release factor 3, domain III | 0.59 | 42.0 | 3.48e-01 | 100.0% | 40.1% |
| 2v1nA01 | 1.10.10.2030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain | 0.58 | 42.0 | 3.77e-01 | 100.0% | 54.5% |
| 2f1fA02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.56 | 39.0 | 3.79e-01 | 100.0% | 65.4% |
| 1fx2A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.56 | 48.0 | 3.44e-01 | 100.0% | 83.4% |
| 2fgcA03 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.55 | 37.0 | 3.69e-01 | 100.0% | 65.8% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.55 | 37.0 | 3.79e-01 | 71.8% | 81.7% |
| 2e9hA01 | 3.30.30.170 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.54 | 39.0 | 3.42e-01 | 77.5% | 51.3% |
| 2uytA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 40.0 | 2.81e-01 | 80.3% | 70.9% |
| 3fryA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 36.0 | 3.79e-01 | 98.6% | 78.1% |
| 2e1mA05 | 1.10.405.10 | Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 | 0.53 | 44.0 | 4.20e-01 | 100.0% | 93.4% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 3.79e-01 | 71.8% | 98.5% |
| 2i4lA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 45.0 | 2.97e-01 | 100.0% | 80.0% |
| 1jqgA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.52 | 38.0 | 3.52e-01 | 100.0% | 61.5% |
| 7xc2A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.32e-01 | 78.9% | 83.0% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.51 | 35.0 | 3.46e-01 | 100.0% | 66.2% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.06e-01 | 80.3% | 82.9% |
| 3im8A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.50 | 37.0 | 3.70e-01 | 93.0% | 76.7% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3265217 | 4340.1.1.1 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb5 | 0.70 | 47.0 | 5.06e-01 | 70.4% | 85.0% |
| 4471453 | 327.16.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 | 0.64 | 42.0 | 4.58e-01 | 76.1% | 81.7% |
| 3975095 | 327.16.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 | 0.61 | 42.0 | 4.55e-01 | 78.9% | 85.0% |
| 4395233 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.61 | 51.0 | 4.10e-01 | 94.4% | 78.6% |
| 4323104 | 304.22.1.0 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain | 0.61 | 42.0 | 4.52e-01 | 100.0% | 85.0% |
| 3951002 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.60 | 37.0 | 3.03e-01 | 97.2% | 33.3% |
| 4327654 | 327.16.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 | 0.60 | 41.0 | 4.34e-01 | 71.8% | 86.7% |
| 4407103 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.60 | 40.0 | 4.34e-01 | 95.8% | 83.3% |
| 3738330 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.59 | 50.0 | 4.07e-01 | 95.8% | 80.7% |
| 4246202 | 304.56.1.6 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › UreE_C | 0.58 | 40.0 | 3.68e-01 | 100.0% | 53.7% |
| 5001396 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 33.0 | 2.83e-01 | 80.3% | 35.4% |
| 2602 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.57 | 35.0 | 2.98e-01 | 100.0% | 35.2% |
| 5082240 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.56 | 37.0 | 3.60e-01 | 100.0% | 60.0% |
| 4285070 | 304.24.1.4 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › RF3_C | 0.56 | 42.0 | 4.11e-01 | 100.0% | 73.8% |
| 5025092 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.56 | 39.0 | 3.87e-01 | 98.6% | 69.3% |
| 3373939 | 304.11.1.11 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › SBDS_C | 0.56 | 38.0 | 3.74e-01 | 100.0% | 63.7% |
| 4167630 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.56 | 44.0 | 4.08e-01 | 85.9% | 68.9% |
| 4073616 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.55 | 39.0 | 4.11e-01 | 100.0% | 83.1% |
| 3923920 | 148.1.1.8 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TFIID_30kDa | 0.55 | 38.0 | 3.37e-01 | 88.7% | 49.5% |
| 5057754 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.54 | 37.0 | 3.30e-01 | 70.4% | 54.3% |
| 3630540 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.54 | 46.0 | 3.19e-01 | 100.0% | 52.5% |
| 4431518 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.53 | 38.0 | 3.53e-01 | 77.5% | 64.2% |
| 4948719 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.53 | 36.0 | 3.35e-01 | 73.2% | 62.0% |
| 3603319 | 304.8.1.7 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C | 0.53 | 36.0 | 3.55e-01 | 100.0% | 63.7% |
| 3666925 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.53 | 39.0 | 3.29e-01 | 80.3% | 70.4% |
| 3466252 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 38.0 | 2.33e-01 | 80.3% | 32.2% |
| 1824176 | 304.7.1.12 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › LicP_NPro | 0.52 | 35.0 | 3.73e-01 | 100.0% | 82.3% |
| 4615793 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.51 | 41.0 | 3.92e-01 | 94.4% | 91.1% |
| 2834167 | 304.37.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr | 0.51 | 35.0 | 3.38e-01 | 100.0% | 62.2% |
| 4988554 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 37.0 | 3.85e-01 | 100.0% | 89.2% |
| 3279061 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.50 | 38.0 | 3.84e-01 | 100.0% | 85.7% |
| 4200968 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.50 | 33.0 | 3.14e-01 | 77.5% | 56.5% |