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OP172873.1__UVT31528.1__SEA_SEJANUS_98__00098
Bact-VirOP172873.1__UVT31528.1__SEA_SEJANUS_98__00098
Identity
- Accession:
- OP172873 ↗
- Kingdom:
- phage
Quality
83.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-105_130-158
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3u97A00 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.76 | 43.0 | 5.64e-01 | 70.7% | 97.4% |
| 2kxgA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 35.0 | 4.05e-01 | 70.7% | 78.9% |
| 4hn7A00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 37.0 | 4.58e-01 | 84.2% | 100.0% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.55 | 41.0 | 4.25e-01 | 100.0% | 83.9% |
| 3vwaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 29.0 | 3.47e-01 | 91.7% | 75.6% |
| 7bwcA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 46.0 | 3.47e-01 | 94.0% | 87.9% |
| 5ay6A01 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.53 | 42.0 | 3.94e-01 | 87.2% | 93.0% |
| 3wasA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 46.0 | 3.29e-01 | 100.0% | 58.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928898 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.68 | 32.0 | 4.21e-01 | 70.7% | 80.0% |
| 1678533 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.64 | 30.0 | 4.11e-01 | 71.4% | 85.7% |
| 4977517 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.62 | 31.0 | 4.03e-01 | 78.9% | 85.3% |
| 3808162 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 34.0 | 4.11e-01 | 72.9% | 83.3% |
| 3496143 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.55 | 38.0 | 3.77e-01 | 96.2% | 65.5% |
| 4011669 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.53 | 37.0 | 3.48e-01 | 71.4% | 82.4% |
| 4022410 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.52 | 36.0 | 3.49e-01 | 89.5% | 63.4% |
| 3169459 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.52 | 40.0 | 2.77e-01 | 80.5% | 31.3% |
| 4994841 | 5.1.2.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_130 | 0.52 | 47.0 | 3.48e-01 | 100.0% | 86.6% |
| 3643233 | 5.1.5.167 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF30506 | 0.51 | 46.0 | 3.22e-01 | 97.0% | 43.3% |
| 3445964 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 43.0 | 3.41e-01 | 88.7% | 95.1% |
| 3926803 | 5.1.4.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 | 0.51 | 45.0 | 2.99e-01 | 97.7% | 63.4% |
| 5034786 | 11.1.1.88 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM9_1 | 0.50 | 35.0 | 3.12e-01 | 88.7% | 48.0% |
D2
medium
residues 187-219
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pntA01 | 1.10.10.1660 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nicotine adenine dinucleotide glycohydrolase, helical linker domain | 0.83 | 65.0 | 5.04e-01 | 90.9% | 40.0% |
| 2xb1A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.82 | 61.0 | 4.35e-01 | 81.8% | 28.1% |
| 3hz6A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.80 | 61.0 | 3.62e-01 | 90.9% | 11.7% |
| 3no7A00 | 6.10.180.30 | Special › Helix non-globular › Arc Repressor Mutant › | 0.79 | 64.0 | 5.46e-01 | 100.0% | 55.0% |
| 2o5iN05 | 1.10.40.90 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › | 0.73 | 56.0 | 5.00e-01 | 100.0% | 57.7% |
| 2uytA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.73 | 55.0 | 3.32e-01 | 93.9% | 11.9% |
| 7dklA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 58.0 | 4.32e-01 | 97.0% | 34.4% |
| 1d8cA03 | 1.20.1220.12 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III | 0.60 | 49.0 | 3.42e-01 | 100.0% | 91.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4977121 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.99 | 92.0 | 8.55e-01 | 100.0% | 82.5% |
| 5052797 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.99 | 91.0 | 7.02e-01 | 100.0% | 50.8% |
| 5015051 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.99 | 90.0 | 6.84e-01 | 100.0% | 47.1% |
| 5035172 | 101.1.11.31 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_8 | 0.98 | 89.0 | 6.94e-01 | 100.0% | 50.8% |
| 4680065 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.97 | 89.0 | 7.09e-01 | 100.0% | 55.0% |
| 4938238 | 101.1.11.4 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › ParD_antitoxin | 0.97 | 88.0 | 7.08e-01 | 100.0% | 55.0% |
| 4990580 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.97 | 88.0 | 7.52e-01 | 100.0% | 66.0% |
| 4992360 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.97 | 87.0 | 7.24e-01 | 100.0% | 60.0% |
| 5056710 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.96 | 86.0 | 6.73e-01 | 100.0% | 50.8% |
| 5077239 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.96 | 85.0 | 6.26e-01 | 100.0% | 41.2% |
| 4937716 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.95 | 85.0 | 7.08e-01 | 100.0% | 60.0% |
| 5064918 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.95 | 84.0 | 7.59e-01 | 100.0% | 73.3% |
| 4959352 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.84 | 68.0 | 5.38e-01 | 100.0% | 44.0% |
| 4927061 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.83 | 67.0 | 6.09e-01 | 100.0% | 66.0% |
| 3284090 | 2484.1.1.32 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C | 0.81 | 62.0 | 3.66e-01 | 90.9% | 11.7% |
| 3963154 | 101.1.11.115 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › Mb1296_C | 0.76 | 61.0 | 5.41e-01 | 100.0% | 61.1% |
| 2784703 | 101.1.2.12 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEP | 0.73 | 58.0 | 4.16e-01 | 97.0% | 29.2% |
| 4031790 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.73 | 55.0 | 5.20e-01 | 87.9% | 70.0% |
| 3165406 | 4959.1.1.0 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit | 0.70 | 54.0 | 5.15e-01 | 90.9% | 72.5% |
| 3966250 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.70 | 53.0 | 5.12e-01 | 90.9% | 72.5% |
| 4073169 | 4951.1.1.0 ↗ | alpha arrays › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit | 0.69 | 49.0 | 4.67e-01 | 81.8% | 65.0% |
| 4139843 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.68 | 56.0 | 5.10e-01 | 100.0% | 68.9% |
| 5023885 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.64 | 48.0 | 4.03e-01 | 87.9% | 55.4% |