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OP186293.1__UVD36458.1__RCXUPER_30__00011
Bact-VirOP186293.1__UVD36458.1__RCXUPER_30__00011
Identity
- Accession:
- OP186293 ↗
- Kingdom:
- phage
Quality
88.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-66
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2basA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.69 | 54.0 | 4.40e-01 | 98.3% | 44.8% |
| 2zbbA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.68 | 52.0 | 4.74e-01 | 98.3% | 61.7% |
| 3lifA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.68 | 50.0 | 4.44e-01 | 98.3% | 53.3% |
| 1bf5A04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.67 | 51.0 | 4.20e-01 | 100.0% | 44.2% |
| 3e0vB01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.65 | 45.0 | 3.31e-01 | 79.7% | 26.7% |
| 4ywzB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 52.0 | 3.99e-01 | 100.0% | 80.1% |
| 3gdiA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 49.0 | 4.13e-01 | 100.0% | 52.3% |
| 2nwvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.59 | 40.0 | 3.32e-01 | 71.2% | 58.9% |
| 6a6fA00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.59 | 45.0 | 3.50e-01 | 84.7% | 73.5% |
| 1eysH01 | 4.10.540.10 | Few Secondary Structures › Irregular › Photosynthetic Reaction Center; Chain H, domain 1 › Photosynthetic reaction centre, H subunit, N-terminal domain | 0.58 | 32.0 | 2.73e-01 | 89.8% | 32.0% |
| 2uvaG07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.57 | 40.0 | 3.15e-01 | 94.9% | 33.1% |
| 2qkpD00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 47.0 | 3.75e-01 | 100.0% | 56.0% |
| 6wo0A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.56 | 48.0 | 3.34e-01 | 100.0% | 53.5% |
| 2fr5A00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.56 | 49.0 | 3.77e-01 | 100.0% | 86.8% |
| 2au3A02 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.55 | 46.0 | 3.62e-01 | 93.2% | 94.5% |
| 2hboA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 48.0 | 3.73e-01 | 100.0% | 45.9% |
| 1qe0A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 45.0 | 2.99e-01 | 100.0% | 71.3% |
| 1xi7A00 | 4.10.40.20 | Few Secondary Structures › Irregular › Omega-AgatoxinV › | 0.55 | 38.0 | 4.10e-01 | 84.7% | 95.7% |
| 2wstA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.54 | 43.0 | 3.29e-01 | 98.3% | 71.6% |
| 1rxxC01 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.54 | 43.0 | 2.71e-01 | 88.1% | 85.6% |
| 1hyoA01 | 2.30.30.230 | Mainly Beta › Roll › SH3 type barrels. › Fumarylacetoacetase, N-terminal domain | 0.53 | 32.0 | 2.63e-01 | 81.4% | 29.2% |
| 2l66A00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.53 | 30.0 | 3.21e-01 | 98.3% | 64.2% |
| 1p0zA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 46.0 | 3.59e-01 | 100.0% | 74.0% |
| 6gcdA00 | 3.30.920.90 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › | 0.52 | 38.0 | 2.93e-01 | 100.0% | 30.8% |
| 4exoA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 43.0 | 3.37e-01 | 100.0% | 84.2% |
| 1tzzB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 39.0 | 3.21e-01 | 84.7% | 57.1% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.52 | 40.0 | 3.56e-01 | 86.4% | 60.7% |
| 1cx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 40.0 | 2.72e-01 | 100.0% | 94.8% |
| 3ga7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 45.0 | 2.86e-01 | 100.0% | 20.5% |
| 3w6sC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 42.0 | 2.86e-01 | 94.9% | 35.9% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018703 | 815.1.1.0 ↗ | a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 | 0.68 | 59.0 | 5.20e-01 | 100.0% | 77.8% |
| 3625217 | 223.2.1.37 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › C9orf72-like | 0.67 | 55.0 | 3.85e-01 | 100.0% | 27.5% |
| 4319690 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.67 | 57.0 | 4.57e-01 | 100.0% | 47.5% |
| 5045117 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 47.0 | 4.70e-01 | 100.0% | 75.0% |
| 3780458 | 223.2.1.51 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Njmu-R1 | 0.65 | 56.0 | 4.29e-01 | 100.0% | 49.0% |
| 5053150 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 56.0 | 4.22e-01 | 100.0% | 40.0% |
| 5048387 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.62 | 51.0 | 5.09e-01 | 100.0% | 88.3% |
| 3657233 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.61 | 53.0 | 3.67e-01 | 100.0% | 50.7% |
| 3700781 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.60 | 51.0 | 4.03e-01 | 100.0% | 44.6% |
| 3287572 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.59 | 46.0 | 3.22e-01 | 86.4% | 39.0% |
| 3589518 | 244.3.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N | 0.58 | 46.0 | 3.46e-01 | 86.4% | 68.7% |
| 1177166 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 34.0 | 3.66e-01 | 74.6% | 72.7% |
| 2485688 | 64.5.1.1 ↗ | beta meanders › WW domain-like › Connector region of RNA helicase HrpB › Connector region of RNA helicase HrpB › CON_HrpB | 0.57 | 34.0 | 3.83e-01 | 74.6% | 91.7% |
| 3998298 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 47.0 | 3.32e-01 | 100.0% | 28.1% |
| 3889863 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.56 | 39.0 | 3.15e-01 | 74.6% | 60.8% |
| 3606476 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 41.0 | 4.24e-01 | 98.3% | 92.7% |
| 4382028 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 33.0 | 3.86e-01 | 76.3% | 90.0% |
| 3804746 | 1.1.11.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 | 0.55 | 47.0 | 3.78e-01 | 98.3% | 63.9% |
| 3941521 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.55 | 45.0 | 3.80e-01 | 100.0% | 65.5% |
| 3913070 | 331.4.1.3 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › AdenylateSensor | 0.54 | 40.0 | 3.56e-01 | 81.4% | 64.8% |
| 3494457 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.54 | 41.0 | 3.28e-01 | 81.4% | 48.7% |
| None | — | 0.53 | 39.0 | 2.36e-01 | 81.4% | 12.1% | |
| 3786336 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.51 | 37.0 | 2.85e-01 | 83.1% | 57.6% |
| 3230823 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.50 | 41.0 | 2.90e-01 | 100.0% | 66.7% |
| 4052385 | 2003.1.10.14 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Rimk_N | 0.50 | 34.0 | 2.89e-01 | 71.2% | 77.1% |